RNA–Protein interactions for RNA: ENST00000558541.5

CPNE6-207, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-207ENST00000558541 A0A0G2JLL6 359 aaPredicted RBP16.69■□□□□ 0.26
CPNE6-207ENST00000558541 GRM8O00222 908 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 HMMRO75330 724 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 PRRT2Q7Z6L0 340 aaPredicted RBP16.69■□□□□ 0.26
CPNE6-207ENST00000558541 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 MEIS3Q99687 375 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 PRKAG2Q9UGJ0 569 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 SLC45A1Q9Y2W3 748 aa16.69■□□□□ 0.26
CPNE6-207ENST00000558541 CASP7P55210 303 aa16.68■□□□□ 0.26
CPNE6-207ENST00000558541 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
CPNE6-207ENST00000558541 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
CPNE6-207ENST00000558541 ANKRD44Q8N8A2 993 aa16.68■□□□□ 0.26
CPNE6-207ENST00000558541 MAP3K12Q12852 859 aa16.67■□□□□ 0.26
CPNE6-207ENST00000558541 UBE4AQ14139 1066 aa16.67■□□□□ 0.26
CPNE6-207ENST00000558541 MAST3O60307 1309 aa16.67■□□□□ 0.26
CPNE6-207ENST00000558541 TRIM75PA6NK02 468 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 COL6A1P12109 1028 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
CPNE6-207ENST00000558541 CYP2B6P20813 491 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
CPNE6-207ENST00000558541 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 SHHQ15465 462 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 FAM110CQ1W6H9 321 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 SCYL3Q8IZE3 742 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 TRIB2Q92519 343 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 TTYH1Q9H313 450 aaPredicted RBP16.66■□□□□ 0.26
CPNE6-207ENST00000558541 PNMA3Q9UL41 463 aa16.66■□□□□ 0.26
CPNE6-207ENST00000558541 PTPRAP18433 802 aa16.65■□□□□ 0.26
CPNE6-207ENST00000558541 FOXO4P98177 505 aa16.65■□□□□ 0.26
CPNE6-207ENST00000558541 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
CPNE6-207ENST00000558541 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
CPNE6-207ENST00000558541 SENP6Q9GZR1 1112 aaPredicted RBP16.65■□□□□ 0.26
CPNE6-207ENST00000558541 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
CPNE6-207ENST00000558541 MUC3AQ02505 3323 aa16.65■□□□□ 0.26
CPNE6-207ENST00000558541 PLXNB2O15031 1838 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 IGHDP01880 384 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 CAVIN4Q5BKX8 364 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 CEP85Q6P2H3 762 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 HHIPL2Q6UWX4 724 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 GJD2Q9UKL4 321 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
CPNE6-207ENST00000558541 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
CPNE6-207ENST00000558541 DOCK2Q92608 1830 aa16.63■□□□□ 0.25
CPNE6-207ENST00000558541 MYH13Q9UKX3 1938 aa16.63■□□□□ 0.25
CPNE6-207ENST00000558541 NBPF7P0C2Y1 421 aaPredicted RBP16.63■□□□□ 0.25
CPNE6-207ENST00000558541 ATN1P54259 1190 aaPredicted RBP16.63■□□□□ 0.25
CPNE6-207ENST00000558541 MTX1Q13505 466 aa16.63■□□□□ 0.25
CPNE6-207ENST00000558541 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
CPNE6-207ENST00000558541 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
CPNE6-207ENST00000558541 CDH23Q9H251 3354 aa16.62■□□□□ 0.25
CPNE6-207ENST00000558541 C9orf50Q5SZB4 431 aa16.62■□□□□ 0.25
CPNE6-207ENST00000558541 TREML2Q5T2D2 321 aa16.62■□□□□ 0.25
CPNE6-207ENST00000558541 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
CPNE6-207ENST00000558541 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
CPNE6-207ENST00000558541 DOCK1Q14185 1865 aa16.62■□□□□ 0.25
CPNE6-207ENST00000558541 MAST2Q6P0Q8 1798 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 LTBP2Q14767 1821 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 GCLCP48506 637 aaPredicted RBP16.61■□□□□ 0.25
CPNE6-207ENST00000558541 SMAD3P84022 425 aaKnown RBP16.61■□□□□ 0.25
CPNE6-207ENST00000558541 NFIAQ12857 509 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 CDC42EP5Q6NZY7 148 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 USP38Q8NB14 1042 aa16.61■□□□□ 0.25
CPNE6-207ENST00000558541 PHF20L1A8MW92 1017 aa16.6■□□□□ 0.25
CPNE6-207ENST00000558541 CCND3P30281 292 aaPredicted RBP16.6■□□□□ 0.25
CPNE6-207ENST00000558541 CACNB2Q08289 660 aaPredicted RBP16.6■□□□□ 0.25
CPNE6-207ENST00000558541 HSP90AB4PQ58FF6 505 aa16.6■□□□□ 0.25
CPNE6-207ENST00000558541 MAP3K21Q5TCX8 1036 aa16.6■□□□□ 0.25
CPNE6-207ENST00000558541 ZSCAN29Q8IWY8 852 aaPredicted RBP16.6■□□□□ 0.25
CPNE6-207ENST00000558541 SSH3Q8TE77 659 aa16.6■□□□□ 0.25
CPNE6-207ENST00000558541 PUS3Q9BZE2 481 aaKnown RBP16.6■□□□□ 0.25
CPNE6-207ENST00000558541 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
CPNE6-207ENST00000558541 FRMPD3Q5JV73 1810 aa16.6■□□□□ 0.25
CPNE6-207ENST00000558541 TCF20Q9UGU0 1960 aaKnown RBP16.6■□□□□ 0.25
CPNE6-207ENST00000558541 ZKSCAN1P17029 563 aaPredicted RBP16.59■□□□□ 0.25
CPNE6-207ENST00000558541 POLA2Q14181 598 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 LHX8Q68G74 356 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 CCDC84Q86UT8 332 aaPredicted RBP16.59■□□□□ 0.25
CPNE6-207ENST00000558541 IL27Q8NEV9 243 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
CPNE6-207ENST00000558541 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 SUGT1Q9Y2Z0 365 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 DNAH12Q6ZR08 3092 aa16.59■□□□□ 0.25
CPNE6-207ENST00000558541 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
CPNE6-207ENST00000558541 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
CPNE6-207ENST00000558541 ZFPM1Q8IX07 1006 aa16.58■□□□□ 0.24
CPNE6-207ENST00000558541 ADAMTS19Q8TE59 1207 aa16.58■□□□□ 0.24
CPNE6-207ENST00000558541 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.58■□□□□ 0.24
CPNE6-207ENST00000558541 FAM198AQ9UFP1 575 aa16.58■□□□□ 0.24
CPNE6-207ENST00000558541 ATP11BQ9Y2G3 1177 aa16.58■□□□□ 0.24
CPNE6-207ENST00000558541 BDP1A6H8Y1 2624 aa16.58■□□□□ 0.24
CPNE6-207ENST00000558541 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
CPNE6-207ENST00000558541 RTP1P59025 263 aa16.57■□□□□ 0.24
CPNE6-207ENST00000558541 PABPC4Q13310 644 aaKnown RBP eCLIP16.57■□□□□ 0.24
CPNE6-207ENST00000558541 CCAR1Q8IX12 1150 aaKnown RBP16.57■□□□□ 0.24
CPNE6-207ENST00000558541 TRMT44Q8IYL2 757 aaKnown RBP16.57■□□□□ 0.24
CPNE6-207ENST00000558541 UHRF1Q96T88 793 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms