RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
SMAD3-205ENST00000558428 DDX60LQ5H9U9 1706 aaKnown RBP14.86□□□□□ -0.03
SMAD3-205ENST00000558428 PHF20L1A8MW92 1017 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 ZBTB48P10074 688 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-205ENST00000558428 CRACR2BQ8N4Y2 399 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-205ENST00000558428 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 BEGAINQ9BUH8 593 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 TRIM34Q9BYJ4 488 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 DCP1AQ9NPI6 582 aaPredicted RBP14.86□□□□□ -0.03
SMAD3-205ENST00000558428 ATP8A2Q9NTI2 1148 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 WBP1LQ9NX94 342 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 MCM9Q9NXL9 1143 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 HERC5Q9UII4 1024 aaKnown RBP14.86□□□□□ -0.03
SMAD3-205ENST00000558428 SLC4A4Q9Y6R1 1079 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 DOCK1Q14185 1865 aa14.86□□□□□ -0.03
SMAD3-205ENST00000558428 M0R2C6 588 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 GPAA1O43292 621 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 POLR3DP05423 398 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-205ENST00000558428 GJA5P36382 358 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 ZMYM1Q5SVZ6 1142 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 NOL9Q5SY16 702 aaKnown RBP14.85□□□□□ -0.03
SMAD3-205ENST00000558428 TTC6Q86TZ1 520 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 FOXP4Q8IVH2 680 aaPredicted RBP14.85□□□□□ -0.03
SMAD3-205ENST00000558428 OTUD5Q96G74 571 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 STRBPQ96SI9 672 aaKnown RBP14.85□□□□□ -0.03
SMAD3-205ENST00000558428 ATAD5Q96QE3 1844 aa14.85□□□□□ -0.03
SMAD3-205ENST00000558428 LAMB1P07942 1786 aa14.84□□□□□ -0.03
SMAD3-205ENST00000558428 SPDYE5A6NIY4 337 aa14.84□□□□□ -0.03
SMAD3-205ENST00000558428 SREBF2Q12772 1141 aa14.84□□□□□ -0.03
SMAD3-205ENST00000558428 ERO1BQ86YB8 467 aa14.84□□□□□ -0.03
SMAD3-205ENST00000558428 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
SMAD3-205ENST00000558428 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
SMAD3-205ENST00000558428 SEC62Q99442 399 aaKnown RBP14.84□□□□□ -0.03
SMAD3-205ENST00000558428 DNAJC18Q9H819 358 aa14.84□□□□□ -0.03
SMAD3-205ENST00000558428 MANSC4A6NHS7 340 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-205ENST00000558428 CTNND1O60716 968 aaKnown RBP14.83□□□□□ -0.04
SMAD3-205ENST00000558428 PLCD1P51178 756 aa14.83□□□□□ -0.04
SMAD3-205ENST00000558428 PPATQ06203 517 aa14.83□□□□□ -0.04
SMAD3-205ENST00000558428 TTC22Q5TAA0 569 aa14.83□□□□□ -0.04
SMAD3-205ENST00000558428 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
SMAD3-205ENST00000558428 EHD4Q9H223 541 aa14.83□□□□□ -0.04
SMAD3-205ENST00000558428 PICK1Q9NRD5 415 aa14.83□□□□□ -0.04
SMAD3-205ENST00000558428 SERPINB13Q9UIV8 391 aa14.83□□□□□ -0.04
SMAD3-205ENST00000558428 MYH8P13535 1937 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 FOXN1O15353 648 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 CYP2D6P10635 497 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 GNAT2P19087 354 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 CAP2P40123 477 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 PPIL2Q13356 520 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 TICAM2Q86XR7 235 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 AMOTL1Q8IY63 956 aa14.82□□□□□ -0.04
SMAD3-205ENST00000558428 PHIPQ8WWQ0 1821 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 GSG1L2A8MUP6 293 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 IRF6O14896 467 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 APPP05067 770 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 GSPT1P15170 499 aaKnown RBP14.81□□□□□ -0.04
SMAD3-205ENST00000558428 PTPRAP18433 802 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 TM4SF4P48230 202 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 GTF2A2P52657 109 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 EVX2Q03828 476 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 RRP1BQ14684 758 aaKnown RBP14.81□□□□□ -0.04
SMAD3-205ENST00000558428 CCDC129Q6ZRS4 1044 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 FAM227BQ96M60 508 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 HELLSQ9NRZ9 838 aa14.81□□□□□ -0.04
SMAD3-205ENST00000558428 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 USP17L21D6R901 530 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 CA12O43570 354 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 GDF11O95390 407 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 SDSP20132 328 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 TDO2P48775 406 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 INHBEP58166 350 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 NMIQ13287 307 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-205ENST00000558428 ERICH6BQ5W0A0 696 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 GIMAP6Q6P9H5 292 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 CTR9Q6PD62 1173 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 MS4A4AQ96JQ5 239 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 RNF186Q9NXI6 227 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-205ENST00000558428 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-205ENST00000558428 ZHX2Q9Y6X8 837 aa14.8□□□□□ -0.04
SMAD3-205ENST00000558428 CYP2D7A0A087X1C5 515 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 CCL15-CCL14A0A0B4J2E2 113 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 PATL2C9JE40 543 aaKnown RBP14.79□□□□□ -0.04
SMAD3-205ENST00000558428 HIP1O00291 1037 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 TRPA1O75762 1119 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 PTPRFP10586 1907 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 CTCFP49711 727 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-205ENST00000558428 GABPAQ06546 454 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 CCL15Q16663 113 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 MCMDC2Q4G0Z9 681 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 C12orf60Q5U649 245 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 CCDC84Q86UT8 332 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-205ENST00000558428 DYNLL2Q96FJ2 89 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 NACAP1Q9BZK3 213 aa14.79□□□□□ -0.04
SMAD3-205ENST00000558428 EPB41L4AQ9HCS5 686 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms