RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 VIL1P09327 827 aaKnown RBP14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 ZAP70P43403 619 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 MFSD14BQ5SR56 506 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 DACT2Q5SW24 774 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 PRPF38BQ5VTL8 546 aaKnown RBP14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 SKAP1Q86WV1 359 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 FAM160A2Q8N612 972 aaPredicted RBP14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 ABCF2Q9UG63 623 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 PSME4Q14997 1843 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 FAM205AQ6ZU69 1335 aa14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 ZC3H4Q9UPT8 1303 aaKnown RBP14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 COL1A1P02452 1464 aaPredicted RBP14.63□□□□□ -0.07
HMGB1P8-201ENST00000558211 AKAP11Q9UKA4 1901 aa14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 ATP5JP18859 108 aa14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 GMPSP49915 693 aaPredicted RBP14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 TBC1D9Q6ZT07 1266 aa14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 GPC2Q8N158 579 aa14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 CERS5Q8N5B7 392 aa14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 PROCA1Q8NCQ7 364 aaPredicted RBP14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 WDR66Q8TBY9 1149 aa14.62□□□□□ -0.07
HMGB1P8-201ENST00000558211 LILRB3O75022 631 aa14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 MAP4K4O95819 1239 aaPredicted RBP14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 PDE1AP54750 535 aa14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 KIAA0825Q8IV33 1275 aa14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 PLEKHM2Q8IWE5 1019 aa14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 TTC41PQ6P2S7 1318 aa14.61□□□□□ -0.07
HMGB1P8-201ENST00000558211 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 GOLIM4O00461 696 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 ERC2O15083 957 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 CYP2E1P05181 493 aaPredicted RBP14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 YY1P25490 414 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 MTMR2Q13614 643 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 GRIK5Q16478 980 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 QPCTQ16769 361 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 MSS51Q4VC12 460 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 RETREG3Q86VR2 466 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 TBC1D22AQ8WUA7 517 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 EDC3Q96F86 508 aaKnown RBP14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 USB1Q9BQ65 265 aaKnown RBP14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 SALL3Q9BXA9 1300 aa14.6□□□□□ -0.07
HMGB1P8-201ENST00000558211 ZNF646O15015 1829 aaPredicted RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 MYO5AQ9Y4I1 1855 aaKnown RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 GLRX3O76003 335 aaKnown RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 LDHBP07195 334 aaKnown RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 LMOD1P29536 600 aaPredicted RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 RGS3P49796 1198 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 SCNN1DP51172 638 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 AGBL3Q8NEM8 1001 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 PI4K2BQ8TCG2 481 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 RAI14Q9P0K7 980 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 LRP2BPQ9P2M1 347 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 STAP2Q9UGK3 403 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 CNOT7Q9UIV1 285 aaKnown RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 TTF2Q9UNY4 1162 aaKnown RBP14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
HMGB1P8-201ENST00000558211 RPS12P25398 132 aaKnown RBP14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 PRDX5P30044 214 aa14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 EPS15P42566 896 aa14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 FKBP1AP62942 108 aaKnown RBP14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 ZGPATQ8N5A5 531 aaKnown RBP14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 GMLQ99445 158 aa14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 HAUS7Q99871 368 aa14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 PIH1D3Q9NQM4 214 aaKnown RBP14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 PAG1Q9NWQ8 432 aa14.58□□□□□ -0.08
HMGB1P8-201ENST00000558211 SPDYE5A6NIY4 337 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 H7C1D1 291 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 USP17L8P0C7I0 530 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 CSPP1Q1MSJ5 1256 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 SPTY2D1Q68D10 685 aaPredicted RBP14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 OGFOD1Q8N543 542 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 DPF2Q92785 391 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 GPRC5DQ9NZD1 345 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 HDAC9Q9UKV0 1011 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 PDS5AQ29RF7 1337 aaKnown RBP14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 SALL1Q9NSC2 1324 aa14.57□□□□□ -0.08
HMGB1P8-201ENST00000558211 TTF1Q15361 905 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P8-201ENST00000558211 TBC1D10BQ4KMP7 808 aaPredicted RBP14.56□□□□□ -0.08
HMGB1P8-201ENST00000558211 DZIP1Q86YF9 867 aaKnown RBP14.56□□□□□ -0.08
HMGB1P8-201ENST00000558211 NMRK2Q9NPI5 230 aa14.56□□□□□ -0.08
HMGB1P8-201ENST00000558211 HACL1Q9UJ83 578 aa14.56□□□□□ -0.08
HMGB1P8-201ENST00000558211 POTECB2RU33 542 aa14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 PPP2R2DQ66LE6 453 aa14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 RILPL2Q969X0 211 aa14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 SLC6A16Q9GZN6 736 aa14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 OSBPL3Q9H4L5 887 aa14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 AOX1Q06278 1338 aa14.55□□□□□ -0.08
HMGB1P8-201ENST00000558211 IQCA1LA6NCM1 817 aa14.54□□□□□ -0.08
HMGB1P8-201ENST00000558211 S1PR4O95977 384 aa14.54□□□□□ -0.08
HMGB1P8-201ENST00000558211 EPHX2P34913 555 aa14.54□□□□□ -0.08
HMGB1P8-201ENST00000558211 MECOMQ03112 1051 aa14.54□□□□□ -0.08
HMGB1P8-201ENST00000558211 MAP3K12Q12852 859 aa14.54□□□□□ -0.08
HMGB1P8-201ENST00000558211 CFAP100Q494V2 611 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms