RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ACTR5Q9H9F9 607 aaPredicted RBP12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 TUBGCP6Q96RT7 1819 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 DNM1LO00429 736 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 SLC4A8Q2Y0W8 1093 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 GGA2Q9UJY4 613 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
SEMA4B-204ENST00000558065 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 AMPHP49418 695 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 CLPPQ16740 277 aaPredicted RBP12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 CRELD2Q6UXH1 353 aaPredicted RBP12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 SSH1Q8WYL5 1049 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 PUF60Q9UHX1 559 aaKnown RBP12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 NOB1Q9ULX3 412 aaKnown RBP12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 SPO11Q9Y5K1 396 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 NR1I2O75469 434 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 PHEXP78562 749 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 RBM26Q5T8P6 1007 aaKnown RBP12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 MTMR6Q9Y217 621 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 GMEB1Q9Y692 573 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 FANCAO15360 1455 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 KIF5CO60282 957 aa12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 ENOX2Q16206 610 aaKnown RBP12.41□□□□□ -0.42
SEMA4B-204ENST00000558065 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 GOLGA6L7A0A1B0GV03 622 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 LGR5O75473 907 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 MMEP08473 750 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 RHOXF2BP0C7M4 288 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 BPIFB4P59827 614 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 WDR93Q6P2C0 686 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 RHOXF2Q9BQY4 288 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 HECW2Q9P2P5 1572 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 ALDH3A1P30838 453 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 SKOR1P84550 965 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 UHMK1Q8TAS1 419 aaKnown RBP12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 RUFY1Q96T51 708 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 PPP2R2CQ9Y2T4 447 aa12.4□□□□□ -0.42
SEMA4B-204ENST00000558065 SH3TC1Q8TE82 1336 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 NPTXRO95502 500 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 CBX3Q13185 183 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 ARHGAP27Q6ZUM4 889 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 FCHSD1Q86WN1 690 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 CEP57L1Q8IYX8 460 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 ATXN10Q9UBB4 475 aa12.4□□□□□ -0.43
SEMA4B-204ENST00000558065 MYOM2P54296 1465 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 TUBP50607 506 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 PLOD1Q02809 727 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 NSUN2Q08J23 767 aaKnown RBP eCLIP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 CCDC92Q53HC0 331 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 LCA5Q86VQ0 697 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 MAIP1Q8WWC4 291 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 OSBPL1AQ9BXW6 950 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 RABL2AQ9UBK7 228 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 CNGA1P29973 690 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 HOXD11P31277 338 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 ELF3P78545 371 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 ERMNQ8TAM6 284 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 USP33Q8TEY7 942 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 CENPOQ9BU64 300 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 OSBPL7Q9BZF2 842 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 PALM3A6NDB9 673 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 CLCN2P51788 898 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 DYNC1I2Q13409 638 aaKnown RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 PACS1Q6VY07 963 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 BICDL1Q6ZP65 573 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 TMEM139Q8IV31 216 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 ZBTB8BQ8NAP8 495 aaPredicted RBP12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 UBAP1Q9NZ09 502 aa12.39□□□□□ -0.43
SEMA4B-204ENST00000558065 EIF4G3O43432 1585 aaKnown RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 PSMC4P43686 418 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 PSMC1P62191 440 aaKnown RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 C16orf71Q8IYS4 520 aaPredicted RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 FNBP4Q8N3X1 1017 aaPredicted RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 ZNF473Q8WTR7 871 aaKnown RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 COG1Q8WTW3 980 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 RASSF10A6NK89 507 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 NCCRP1Q6ZVX7 275 aaPredicted RBP12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 JAKMIP2Q96AA8 810 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 PCDH18Q9HCL0 1135 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 UBN2Q6ZU65 1347 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 PDCLQ13371 301 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 STIM1Q13586 685 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
SEMA4B-204ENST00000558065 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 HMMRO75330 724 aa12.37□□□□□ -0.43
SEMA4B-204ENST00000558065 MYCLP1P12525 358 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms