RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MMP1P03956 469 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 PCCAP05165 728 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 NR1I3Q14994 352 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 KARSQ15046 597 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 BRD3Q15059 726 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 RILPL1Q5EBL4 403 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 TRMT44Q8IYL2 757 aaKnown RBP13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 ZNF512BQ96KM6 892 aaPredicted RBP13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 PANX2Q96RD6 677 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 MYL10Q9BUA6 226 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 PLA2G12BQ9BX93 195 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 FUT8Q9BYC5 575 aa13.5□□□□□ -0.25
VIPAS39-211ENST00000557658 RIC1Q4ADV7 1423 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 BTBD18B2RXH4 712 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 CSF1RP07333 972 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 IFNAR1P17181 557 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ERCC5P28715 1186 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 PLCD1P51178 756 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 PROSER2Q86WR7 435 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 TSPYL1Q9H0U9 437 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ZNF532Q9HCE3 1301 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 A0A1B0GTH6 734 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 IFIT3O14879 490 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 TOB1P50616 345 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ST5P78524 1137 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ZNF827Q17R98 1081 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 MUM1L1Q5H9M0 696 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 TRIM22Q8IYM9 498 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 AK7Q96M32 723 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 NAA15Q9BXJ9 866 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 SAMSN1Q9NSI8 373 aaKnown RBP13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 CHD4Q14839 1912 aa13.49□□□□□ -0.25
VIPAS39-211ENST00000557658 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 ALX1Q15699 326 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 LONRF2Q1L5Z9 754 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 PIH1D3Q9NQM4 214 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 CEP131Q9UPN4 1083 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 MYO5AQ9Y4I1 1855 aaKnown RBP13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 PDE6AP16499 860 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 CHMP4BP1P59074 171 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 GRIN1Q05586 938 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 CT47A1Q5JQC4 288 aaPredicted RBP13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 LDHAL6AQ6ZMR3 332 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 AIDAQ96BJ3 306 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
VIPAS39-211ENST00000557658 KIF5CO60282 957 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 TUBB2AQ13885 445 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 STRBPQ96SI9 672 aaKnown RBP13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 TUBB2BQ9BVA1 445 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 CNNM2Q9H8M5 875 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 SRPRBQ9Y5M8 271 aaKnown RBP13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 SOWAHDA6NJG2 315 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 ACTN4O43707 911 aaKnown RBP13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 MTF1Q14872 753 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 GRAMD1CQ8IYS0 662 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 ZBTB38Q8NAP3 1195 aaPredicted RBP13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 SPATA20Q8TB22 786 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 EXOC4Q96A65 974 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 LZTFL1Q9NQ48 299 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 ADGRG1Q9Y653 693 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 NID2Q14112 1375 aa13.47□□□□□ -0.25
VIPAS39-211ENST00000557658 TUBB4BP68371 445 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 SLC20A2Q08357 652 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 RTN1Q16799 776 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 ZCRB1Q8TBF4 217 aaKnown RBP13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 MED15Q96RN5 788 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 NAPBQ9H115 298 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 CNNM1Q9NRU3 951 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 PSD3Q9NYI0 1048 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 CDC23Q9UJX2 597 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 PAPPAQ13219 1627 aa13.46□□□□□ -0.25
VIPAS39-211ENST00000557658 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 MAP2K7O14733 419 aa13.46□□□□□ -0.26
VIPAS39-211ENST00000557658 GTF2E1P29083 439 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms