RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 TRIM34Q9BYJ4 488 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 PALD1Q9ULE6 856 aa16.83■□□□□ 0.28
SUPT16H-208ENST00000557652 OTOFQ9HC10 1997 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 DOCK1Q14185 1865 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 SSC5DA1L4H1 1573 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 USP17L12C9JPN9 530 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 USP17L21D6R901 530 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 EPB41L4AQ9HCS5 686 aaPredicted RBP16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 ANAPC4Q9UJX5 808 aa16.82■□□□□ 0.28
SUPT16H-208ENST00000557652 GABPAQ06546 454 aa16.81■□□□□ 0.28
SUPT16H-208ENST00000557652 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
SUPT16H-208ENST00000557652 FOXP2O15409 715 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 FGAP02671 866 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 C1QTNF8P60827 252 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 CST9Q5W186 159 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 ANKRD13AQ8IZ07 590 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 MAP4K1Q92918 833 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
SUPT16H-208ENST00000557652 CTNND1O60716 968 aaKnown RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 USP2O75604 605 aaPredicted RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 MAP3K9P80192 1104 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 PDE4BQ07343 736 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 IMMTQ16891 758 aaKnown RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 NOL9Q5SY16 702 aaKnown RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 LDLRAD1Q5T700 205 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 TATDN1Q6P1N9 297 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 C16orf86Q6ZW13 317 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 CCDC17Q96LX7 622 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 RNF41Q9H4P4 317 aaPredicted RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 SCAF8Q9UPN6 1271 aaKnown RBP16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 TLL2Q9Y6L7 1015 aa16.79■□□□□ 0.28
SUPT16H-208ENST00000557652 PLCD1P51178 756 aa16.78■□□□□ 0.28
SUPT16H-208ENST00000557652 PPARAQ07869 468 aa16.78■□□□□ 0.28
SUPT16H-208ENST00000557652 PRAMEF18Q5VWM3 479 aa16.78■□□□□ 0.28
SUPT16H-208ENST00000557652 ZNF408Q9H9D4 720 aa16.78■□□□□ 0.28
SUPT16H-208ENST00000557652 ANGEL1Q9UNK9 670 aaKnown RBP16.78■□□□□ 0.28
SUPT16H-208ENST00000557652 CSADQ9Y600 493 aa16.78■□□□□ 0.28
SUPT16H-208ENST00000557652 PHF20L1A8MW92 1017 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 ZNF213O14771 459 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 FGRP09769 529 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 PPP4R3BQ5MIZ7 849 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 RNF20Q5VTR2 975 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 SAPCD2Q86UD0 394 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 WRNIP1Q96S55 665 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 IL25Q9H293 177 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.28
SUPT16H-208ENST00000557652 GREB1LQ9C091 1923 aaPredicted RBP16.76■□□□□ 0.27
SUPT16H-208ENST00000557652 MINDY4BA8MYZ0 360 aa16.76■□□□□ 0.27
SUPT16H-208ENST00000557652 ASNSP08243 561 aa16.76■□□□□ 0.27
SUPT16H-208ENST00000557652 HSPA6P17066 643 aa16.76■□□□□ 0.27
SUPT16H-208ENST00000557652 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
SUPT16H-208ENST00000557652 RASSF10A6NK89 507 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 ORC4O43929 436 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 CAP2P40123 477 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 CDK8P49336 464 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 HUNKP57058 714 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 CCDC102AQ96A19 550 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 CNNM2Q9H8M5 875 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 CABP5Q9NP86 173 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 PHIPQ8WWQ0 1821 aa16.75■□□□□ 0.27
SUPT16H-208ENST00000557652 PTPRFP10586 1907 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 SHMT1P34896 483 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 PTH1RQ03431 593 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.273e-8■■■■■ 41
SUPT16H-208ENST00000557652 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 AKNAD1Q5T1N1 836 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 DLK2Q6UY11 383 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 SCYL3Q8IZE3 742 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 ABT1Q9ULW3 272 aaKnown RBP16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 RBM8AQ9Y5S9 174 aaKnown RBP16.74■□□□□ 0.27
SUPT16H-208ENST00000557652 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 CYP2D6P10635 497 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 ECE1P42892 770 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 RGMBQ6NW40 437 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 TMEM179Q6ZVK1 233 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 ERO1BQ86YB8 467 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 ZNF444Q8N0Y2 327 aaPredicted RBP16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
SUPT16H-208ENST00000557652 PLIN4Q96Q06 1357 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms