RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 ELP3Q9H9T3 547 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 PALD1Q9ULE6 856 aa12.74□□□□□ -0.37
HNRNPC-232ENST00000557442 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 M0R2C6 588 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 INPP5BP32019 993 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 MAP2K2P36507 400 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 CRACR2BQ8N4Y2 399 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 OSBP2Q969R2 916 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 TRIM34Q9BYJ4 488 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
HNRNPC-232ENST00000557442 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 GPAA1O43292 621 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 PRKAB2O43741 272 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 TTC22Q5TAA0 569 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 DCP1AQ9NPI6 582 aaPredicted RBP12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 MCM9Q9NXL9 1143 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 SNCAIPQ9Y6H5 919 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 SLC4A4Q9Y6R1 1079 aa12.72□□□□□ -0.37
HNRNPC-232ENST00000557442 TBC1D12O60347 775 aa12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 ZBTB48P10074 688 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 ZMYM1Q5SVZ6 1142 aa12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 TTC6Q86TZ1 520 aa12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 OPTNQ96CV9 577 aa12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 ATP8A2Q9NTI2 1148 aa12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 ZNF112Q9UJU3 913 aa12.71□□□□□ -0.37
HNRNPC-232ENST00000557442 GREB1LQ9C091 1923 aaPredicted RBP12.71□□□□□ -0.38
HNRNPC-232ENST00000557442 SPDYE5A6NIY4 337 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 NOL9Q5SY16 702 aaKnown RBP12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 AMOTL1Q8IY63 956 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 SCYL3Q8IZE3 742 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 SERPINB13Q9UIV8 391 aa12.7□□□□□ -0.38
HNRNPC-232ENST00000557442 A0A0D9SFI3 127 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 CTNND1O60716 968 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 HSPA1AP0DMV8 641 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 HSPA1BP0DMV9 641 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 GSPT1P15170 499 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 GNAT2P19087 354 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 GJA5P36382 358 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 ERICH6BQ5W0A0 696 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 CCDC129Q6ZRS4 1044 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 TICAM2Q86XR7 235 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 FOXP4Q8IVH2 680 aaPredicted RBP12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 EHD4Q9H223 541 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 PICK1Q9NRD5 415 aa12.69□□□□□ -0.38
HNRNPC-232ENST00000557442 APPP05067 770 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 CYP2D6P10635 497 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 TDO2P48775 406 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 PLCD1P51178 756 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 EVX2Q03828 476 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 SREBF2Q12772 1141 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 NMIQ13287 307 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 METTL16Q86W50 562 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 HELLSQ9NRZ9 838 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 DIAPH3Q9NSV4 1193 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 ARPP21Q9UBL0 812 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-232ENST00000557442 CYP2D7A0A087X1C5 515 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 GSG1L2A8MUP6 293 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 USP17L12C9JPN9 530 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 USP17L21D6R901 530 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 HIP1O00291 1037 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 SDSP20132 328 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 CAP2P40123 477 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 PPATQ06203 517 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 PPIL2Q13356 520 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 PPP4R2Q9NY27 417 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 MGAMO43451 1857 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
HNRNPC-232ENST00000557442 IRF6O14896 467 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 GDF11O95390 407 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 PTPRAP18433 802 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 GTF2A2P52657 109 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 RRP1BQ14684 758 aaKnown RBP12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 MCMDC2Q4G0Z9 681 aa12.66□□□□□ -0.38
HNRNPC-232ENST00000557442 C12orf60Q5U649 245 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms