RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 MORF4L1Q9UBU8 362 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 MYH2Q9UKX2 1941 aa15.68■□□□□ 0.1
PSEN1-221ENST00000557293 SEMA3EO15041 775 aa15.67■□□□□ 0.1
PSEN1-221ENST00000557293 ADORA1P30542 326 aa15.67■□□□□ 0.1
PSEN1-221ENST00000557293 LHX8Q68G74 356 aa15.67■□□□□ 0.1
PSEN1-221ENST00000557293 FAM109BQ6ICB4 259 aaPredicted RBP15.67■□□□□ 0.1
PSEN1-221ENST00000557293 GNL3LQ9NVN8 582 aaKnown RBP15.67■□□□□ 0.1
PSEN1-221ENST00000557293 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
PSEN1-221ENST00000557293 GPR75-ASB3A0A0A6YYF3 556 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 CIAO1O76071 339 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 CYP2B6P20813 491 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 BTDP43251 543 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 HMGCS2P54868 508 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 PICALMQ13492 652 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 LRRC26Q2I0M4 334 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 CCDC102BQ68D86 513 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.66■□□□□ 0.1
PSEN1-221ENST00000557293 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 USP6NLQ92738 828 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
PSEN1-221ENST00000557293 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
PSEN1-221ENST00000557293 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
PSEN1-221ENST00000557293 CACNB2Q08289 660 aaPredicted RBP15.65■□□□□ 0.1
PSEN1-221ENST00000557293 RASGRF1Q13972 1273 aa15.65■□□□□ 0.1
PSEN1-221ENST00000557293 POTEEQ6S8J3 1075 aa15.65■□□□□ 0.1
PSEN1-221ENST00000557293 P2RX7Q99572 595 aaKnown RBP15.65■□□□□ 0.1
PSEN1-221ENST00000557293 SIL1Q9H173 461 aa15.65■□□□□ 0.1
PSEN1-221ENST00000557293 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.65■□□□□ 0.1
PSEN1-221ENST00000557293 TXNRD2Q9NNW7 524 aa15.65■□□□□ 0.1
PSEN1-221ENST00000557293 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
PSEN1-221ENST00000557293 COL2A1P02458 1487 aaPredicted RBP15.65■□□□□ 0.1
PSEN1-221ENST00000557293 XRCC5P13010 732 aaKnown RBP15.64■□□□□ 0.09
PSEN1-221ENST00000557293 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
PSEN1-221ENST00000557293 CAP2P40123 477 aa15.64■□□□□ 0.09
PSEN1-221ENST00000557293 JAG1P78504 1218 aa15.64■□□□□ 0.09
PSEN1-221ENST00000557293 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
PSEN1-221ENST00000557293 Q3C1V9 767 aa15.64■□□□□ 0.09
PSEN1-221ENST00000557293 LOC285556D6RIA3 1793 aa15.64■□□□□ 0.09
PSEN1-221ENST00000557293 TIMM10P62072 90 aa15.63■□□□□ 0.09
PSEN1-221ENST00000557293 MECOMQ03112 1051 aa15.63■□□□□ 0.09
PSEN1-221ENST00000557293 ZGPATQ8N5A5 531 aaKnown RBP15.63■□□□□ 0.09
PSEN1-221ENST00000557293 RBPJLQ9UBG7 517 aa15.63■□□□□ 0.09
PSEN1-221ENST00000557293 ABCF2Q9UG63 623 aa15.63■□□□□ 0.09
PSEN1-221ENST00000557293 PA2G4Q9UQ80 394 aaKnown RBP15.63■□□□□ 0.09
PSEN1-221ENST00000557293 MROH7-TTC4A0A0A0MT08 1334 aa15.63■□□□□ 0.09
PSEN1-221ENST00000557293 PTPRCP08575 1304 aa15.63■□□□□ 0.09
PSEN1-221ENST00000557293 USP17L5A8MUK1 530 aa15.62■□□□□ 0.09
PSEN1-221ENST00000557293 CCND3P30281 292 aaPredicted RBP15.62■□□□□ 0.09
PSEN1-221ENST00000557293 HOXA7P31268 230 aaPredicted RBP15.62■□□□□ 0.09
PSEN1-221ENST00000557293 PABPC4Q13310 644 aaKnown RBP eCLIP15.62■□□□□ 0.09
PSEN1-221ENST00000557293 CCL14Q16627 93 aa15.62■□□□□ 0.09
PSEN1-221ENST00000557293 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
PSEN1-221ENST00000557293 WDR18Q9BV38 432 aa15.62■□□□□ 0.09
PSEN1-221ENST00000557293 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
PSEN1-221ENST00000557293 PDS5AQ29RF7 1337 aaKnown RBP15.62■□□□□ 0.09
PSEN1-221ENST00000557293 MORN1Q5T089 497 aa15.61■□□□□ 0.09
PSEN1-221ENST00000557293 DZIP1Q86YF9 867 aaKnown RBP15.61■□□□□ 0.09
PSEN1-221ENST00000557293 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
PSEN1-221ENST00000557293 NUDT12Q9BQG2 462 aa15.61■□□□□ 0.09
PSEN1-221ENST00000557293 TBC1D2Q9BYX2 928 aa15.61■□□□□ 0.09
PSEN1-221ENST00000557293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.61■□□□□ 0.09
PSEN1-221ENST00000557293 ZNF521Q96K83 1311 aa15.61■□□□□ 0.09
PSEN1-221ENST00000557293 IL15P40933 162 aaPredicted RBP15.6■□□□□ 0.09
PSEN1-221ENST00000557293 SPTY2D1Q68D10 685 aaPredicted RBP15.6■□□□□ 0.09
PSEN1-221ENST00000557293 FAM161BQ96MY7 647 aa15.6■□□□□ 0.09
PSEN1-221ENST00000557293 PORCNQ9H237 461 aa15.6■□□□□ 0.09
PSEN1-221ENST00000557293 UNC80Q8N2C7 3258 aa15.6■□□□□ 0.09
PSEN1-221ENST00000557293 BACE1P56817 501 aa15.59■□□□□ 0.09
PSEN1-221ENST00000557293 HERVK_113P62684 666 aa15.59■□□□□ 0.09
PSEN1-221ENST00000557293 SHROOM1Q2M3G4 852 aaPredicted RBP15.59■□□□□ 0.09
PSEN1-221ENST00000557293 GPRC5AQ8NFJ5 357 aa15.59■□□□□ 0.09
PSEN1-221ENST00000557293 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
PSEN1-221ENST00000557293 COPRSQ9NQ92 184 aa15.59■□□□□ 0.09
PSEN1-221ENST00000557293 MAP4K4O95819 1239 aaPredicted RBP15.58■□□□□ 0.08
PSEN1-221ENST00000557293 MTMR2Q13614 643 aa15.58■□□□□ 0.08
PSEN1-221ENST00000557293 TBC1D9Q6ZT07 1266 aa15.58■□□□□ 0.08
PSEN1-221ENST00000557293 ERICH6Q7L0X2 663 aa15.58■□□□□ 0.08
PSEN1-221ENST00000557293 TRMT44Q8IYL2 757 aaKnown RBP15.58■□□□□ 0.08
PSEN1-221ENST00000557293 SOCS4Q8WXH5 440 aa15.58■□□□□ 0.08
PSEN1-221ENST00000557293 XAGE2Q96GT9 111 aa15.58■□□□□ 0.08
PSEN1-221ENST00000557293 HMG20BQ9P0W2 317 aa15.58■□□□□ 0.08
PSEN1-221ENST00000557293 ATAD5Q96QE3 1844 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 ZKSCAN1P17029 563 aaPredicted RBP15.57■□□□□ 0.08
PSEN1-221ENST00000557293 MAPK4P31152 587 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
PSEN1-221ENST00000557293 PI16Q6UXB8 463 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 GPR142Q7Z601 462 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 METTL16Q86W50 562 aaKnown RBP15.57■□□□□ 0.08
PSEN1-221ENST00000557293 CDX2Q99626 313 aaPredicted RBP15.57■□□□□ 0.08
PSEN1-221ENST00000557293 DNAJC18Q9H819 358 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 AS3MTQ9HBK9 375 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 FLRT1Q9NZU1 646 aa15.57■□□□□ 0.08
PSEN1-221ENST00000557293 A0A1B0GUL7 405 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 IGHA2P01877 340 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 LDHCP07864 332 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 ERVK-9P63128 1117 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 ERVK-24P63145 666 aa15.56■□□□□ 0.08
PSEN1-221ENST00000557293 SENP6Q9GZR1 1112 aaPredicted RBP15.56■□□□□ 0.08
PSEN1-221ENST00000557293 SEMA6BQ9H3T3 888 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms