RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 ZKSCAN4Q969J2 545 aaPredicted RBP25.1■■□□□ 1.61
SEC23A-213ENST00000557280 HHIPL1Q96JK4 782 aa25.1■■□□□ 1.61
SEC23A-213ENST00000557280 CEP350Q5VT06 3117 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 PHF20L1A8MW92 1017 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 VEGFBP49765 207 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 RRP1BQ14684 758 aaKnown RBP25.09■■□□□ 1.61
SEC23A-213ENST00000557280 BMP2KLQ5H9B9 411 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 RASAL3Q86YV0 1011 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.09■■□□□ 1.61
SEC23A-213ENST00000557280 PI4KBQ9UBF8 816 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 ZNF112Q9UJU3 913 aa25.09■■□□□ 1.61
SEC23A-213ENST00000557280 FAM155AB1AL88 458 aaPredicted RBP25.08■■□□□ 1.61
SEC23A-213ENST00000557280 HLA-DOAP06340 250 aa25.08■■□□□ 1.61
SEC23A-213ENST00000557280 GNAT2P19087 354 aa25.08■■□□□ 1.61
SEC23A-213ENST00000557280 CHMLP26374 656 aa25.08■■□□□ 1.61
SEC23A-213ENST00000557280 ZNF157P51786 506 aaPredicted RBP25.08■■□□□ 1.61
SEC23A-213ENST00000557280 MAP3K9P80192 1104 aa25.08■■□□□ 1.61
SEC23A-213ENST00000557280 CAPNS2Q96L46 248 aa25.08■■□□□ 1.61
SEC23A-213ENST00000557280 SNCAIPQ9Y6H5 919 aa25.08■■□□□ 1.61
SEC23A-213ENST00000557280 CCDC171Q6TFL3 1326 aa25.08■■□□□ 1.6
SEC23A-213ENST00000557280 USP17L12C9JPN9 530 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 USP17L21D6R901 530 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 HIP1O00291 1037 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 TBC1D12O60347 775 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 POLR3DP05423 398 aaPredicted RBP25.07■■□□□ 1.6
SEC23A-213ENST00000557280 CTR9Q6PD62 1173 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 METTL16Q86W50 562 aaKnown RBP25.07■■□□□ 1.6
SEC23A-213ENST00000557280 ANKRD13AQ8IZ07 590 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 CNKSR2Q8WXI2 1034 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 ELP3Q9H9T3 547 aa25.07■■□□□ 1.6
SEC23A-213ENST00000557280 PATL2C9JE40 543 aaKnown RBP25.06■■□□□ 1.6
SEC23A-213ENST00000557280 APPP05067 770 aa25.06■■□□□ 1.6
SEC23A-213ENST00000557280 SLC10A3P09131 477 aa25.06■■□□□ 1.6
SEC23A-213ENST00000557280 SHROOM1Q2M3G4 852 aaPredicted RBP25.06■■□□□ 1.6
SEC23A-213ENST00000557280 IFNL3Q8IZI9 196 aa25.06■■□□□ 1.6
SEC23A-213ENST00000557280 EHD4Q9H223 541 aa25.06■■□□□ 1.6
SEC23A-213ENST00000557280 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.06■■□□□ 1.6
SEC23A-213ENST00000557280 HERC5Q9UII4 1024 aaKnown RBP25.06■■□□□ 1.6
SEC23A-213ENST00000557280 LAMB1P07942 1786 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 THSD7BQ9C0I4 1608 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 AOC2O75106 756 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 C12orf60Q5U649 245 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 TTC6Q86TZ1 520 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 CRACR2BQ8N4Y2 399 aaPredicted RBP25.05■■□□□ 1.6
SEC23A-213ENST00000557280 SLC44A5Q8NCS7 719 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 DYNLL2Q96FJ2 89 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 ZIC5Q96T25 663 aa25.05■■□□□ 1.6
SEC23A-213ENST00000557280 WDR33Q9C0J8 1336 aaKnown RBP25.05■■□□□ 1.6
SEC23A-213ENST00000557280 GJA5P36382 358 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 TDO2P48775 406 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 JAG1P78504 1218 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 GABPAQ06546 454 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 MKRN3Q13064 507 aaKnown RBP25.04■■□□□ 1.6
SEC23A-213ENST00000557280 GIMAP6Q6P9H5 292 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 FOXP4Q8IVH2 680 aaPredicted RBP25.04■■□□□ 1.6
SEC23A-213ENST00000557280 DDRGK1Q96HY6 314 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 SERPINB13Q9UIV8 391 aa25.04■■□□□ 1.6
SEC23A-213ENST00000557280 DOCK1Q14185 1865 aa25.03■■□□□ 1.6
SEC23A-213ENST00000557280 HSPD1P10809 573 aaKnown RBP25.03■■□□□ 1.6
SEC23A-213ENST00000557280 SLC10A4Q96EP9 437 aa25.03■■□□□ 1.6
SEC23A-213ENST00000557280 ARPP21Q9UBL0 812 aaPredicted RBP25.03■■□□□ 1.6
SEC23A-213ENST00000557280 CSADQ9Y600 493 aa25.03■■□□□ 1.6
SEC23A-213ENST00000557280 SHMT1P34896 483 aa25.02■■□□□ 1.6
SEC23A-213ENST00000557280 NOL9Q5SY16 702 aaKnown RBP25.02■■□□□ 1.6
SEC23A-213ENST00000557280 TRIM34Q9BYJ4 488 aa25.02■■□□□ 1.6
SEC23A-213ENST00000557280 UNCXA6NJT0 531 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 GDF11O95390 407 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 ECE1P42892 770 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 SBK1Q52WX2 424 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 CCDC84Q86UT8 332 aaPredicted RBP25.01■■□□□ 1.59
SEC23A-213ENST00000557280 SCYL3Q8IZE3 742 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 OPTNQ96CV9 577 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 WNK4Q96J92 1243 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 NAPBQ9H115 298 aa25.01■■□□□ 1.59
SEC23A-213ENST00000557280 MINDY4BA8MYZ0 360 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 SPRYD7Q5W111 196 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 STK11IPQ8N1F8 1099 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 CCDC102AQ96A19 550 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 NACAP1Q9BZK3 213 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 RAD50Q92878 1312 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 ROBO3Q96MS0 1386 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 ATAD5Q96QE3 1844 aa25■■□□□ 1.59
SEC23A-213ENST00000557280 SPDYE5A6NIY4 337 aa24.99■■□□□ 1.59
SEC23A-213ENST00000557280 SGSM2O43147 1006 aa24.99■■□□□ 1.59
SEC23A-213ENST00000557280 CTNND1O60716 968 aaKnown RBP24.99■■□□□ 1.59
SEC23A-213ENST00000557280 CAP2P40123 477 aa24.99■■□□□ 1.59
SEC23A-213ENST00000557280 TATDN1Q6P1N9 297 aa24.99■■□□□ 1.59
SEC23A-213ENST00000557280 OTUD5Q96G74 571 aa24.99■■□□□ 1.59
SEC23A-213ENST00000557280 C16orf86Q6ZW13 317 aa24.98■■□□□ 1.59
SEC23A-213ENST00000557280 AMOTL1Q8IY63 956 aa24.98■■□□□ 1.59
SEC23A-213ENST00000557280 GTF3C3Q9Y5Q9 886 aa24.98■■□□□ 1.59
SEC23A-213ENST00000557280 FGAP02671 866 aa24.97■■□□□ 1.59
SEC23A-213ENST00000557280 PTPRAP18433 802 aa24.97■■□□□ 1.59
SEC23A-213ENST00000557280 MFAP1P55081 439 aaKnown RBP24.97■■□□□ 1.59
SEC23A-213ENST00000557280 ALX1Q15699 326 aa24.97■■□□□ 1.59
SEC23A-213ENST00000557280 CDK8P49336 464 aa24.96■■□□□ 1.59
SEC23A-213ENST00000557280 KIF23Q02241 960 aaPredicted RBP24.96■■□□□ 1.59
SEC23A-213ENST00000557280 PPARAQ07869 468 aa24.96■■□□□ 1.59
SEC23A-213ENST00000557280 NOGQ13253 232 aa24.96■■□□□ 1.59
SEC23A-213ENST00000557280 ERO1BQ86YB8 467 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms