RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ODF2LQ9ULJ1 636 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
NEK9-210ENST00000557026 TFDP1Q14186 410 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 ZNF408Q9H9D4 720 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 ATP7BP35670 1465 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 PFDN6O15212 129 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 TRIM37O94972 964 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
NEK9-210ENST00000557026 PHKG2P15735 406 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 CPLX3Q8WVH0 158 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 CEP63Q96MT8 703 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 TESK2Q96S53 571 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 MAGEF1Q9HAY2 307 aa13.38□□□□□ -0.27
NEK9-210ENST00000557026 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
NEK9-210ENST00000557026 BCRP11274 1271 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 IFT122Q9HBG6 1241 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
NEK9-210ENST00000557026 GOLGA8CPA6NN73 597 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 CALCOCO2Q13137 446 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 GSTA5Q7RTV2 222 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 DHX58Q96C10 678 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
NEK9-210ENST00000557026 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 KDRP35968 1356 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
NEK9-210ENST00000557026 ATP5JP18859 108 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 AFMP43652 599 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
NEK9-210ENST00000557026 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 FAM204AQ9H8W3 233 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 ZNF277Q9NRM2 450 aaPredicted RBP13.37□□□□□ -0.27
NEK9-210ENST00000557026 ABCA8O94911 1581 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 A6NNZ2 444 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 TUBB8Q3ZCM7 444 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 CCDC26Q8TAB7 109 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 FEZ2Q9UHY8 353 aaPredicted RBP13.37□□□□□ -0.27
NEK9-210ENST00000557026 PCDHB13Q9Y5F0 798 aa13.37□□□□□ -0.27
NEK9-210ENST00000557026 CIAO1O76071 339 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 COPB2P35606 906 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 INF2Q27J81 1249 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 GPATCH4Q5T3I0 446 aaKnown RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 RPAP1Q9BWH6 1393 aaPredicted RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 MAP3K15Q6ZN16 1313 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 PRIMPOLQ96LW4 560 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 RIOK1Q9BRS2 568 aaKnown RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 TM6SF1Q9BZW5 370 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 TSKSQ9UJT2 592 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 TTF2Q9UNY4 1162 aaKnown RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 GMNNO75496 209 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 TNNT1P13805 278 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 CHMLP26374 656 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 YARSP54577 528 aaKnown RBP13.36□□□□□ -0.27
NEK9-210ENST00000557026 BIRC2Q13490 618 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 KCTD2Q14681 263 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 NACA2Q9H009 215 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
NEK9-210ENST00000557026 SSH2Q76I76 1423 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 CCDC169A6NNP5 214 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 IVLP07476 585 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 CUL4BQ13620 913 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 EAPPQ56P03 285 aaPredicted RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 RNF34Q969K3 372 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 GPAA1O43292 621 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 DDAH1O94760 285 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 RPS6KB1P23443 525 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 MCM7P33993 719 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 CTR9Q6PD62 1173 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 UBL4BQ8N7F7 174 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 MLKLQ8NB16 471 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 FAM193BQ96PV7 902 aaPredicted RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 AP5M1Q9H0R1 490 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 UGGT1Q9NYU2 1555 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 F8W8V4 182 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 POLR2MP0CAP2 368 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 KRT10P13645 584 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 AOC3Q16853 763 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 LETM2Q2VYF4 491 aa13.35□□□□□ -0.27
NEK9-210ENST00000557026 REXO1Q8N1G1 1221 aaKnown RBP13.35□□□□□ -0.27
NEK9-210ENST00000557026 TBC1D2Q9BYX2 928 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms