RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 DOCK1Q14185 1865 aa27.63■■■□□ 2.01
TMEM260-214ENST00000556975 MAP3K12Q12852 859 aa27.62■■■□□ 2.01
TMEM260-214ENST00000556975 GPAT2Q6NUI2 795 aa27.62■■■□□ 2.01
TMEM260-214ENST00000556975 C17orf99Q6UX52 265 aa27.62■■■□□ 2.01
TMEM260-214ENST00000556975 FASTKD5Q7L8L6 764 aaKnown RBP27.62■■■□□ 2.01
TMEM260-214ENST00000556975 FAM196BA6NMK8 535 aa27.61■■■□□ 2.01
TMEM260-214ENST00000556975 APBB1O00213 710 aa27.61■■■□□ 2.01
TMEM260-214ENST00000556975 IFIT2P09913 472 aaKnown RBP27.61■■■□□ 2.01
TMEM260-214ENST00000556975 METTL16Q86W50 562 aaKnown RBP27.61■■■□□ 2.01
TMEM260-214ENST00000556975 FOCADQ5VW36 1801 aa27.61■■■□□ 2.01
TMEM260-214ENST00000556975 CDK5RAP2Q96SN8 1893 aa27.61■■■□□ 2.01
TMEM260-214ENST00000556975 FLT1P17948 1338 aa27.61■■■□□ 2.01
TMEM260-214ENST00000556975 PHIPQ8WWQ0 1821 aa27.6■■■□□ 2.01
TMEM260-214ENST00000556975 DYNLL1P63167 89 aaKnown RBP27.6■■■□□ 2.01
TMEM260-214ENST00000556975 TTF1Q15361 905 aaPredicted RBP27.6■■■□□ 2.01
TMEM260-214ENST00000556975 FOXP4Q8IVH2 680 aaPredicted RBP27.6■■■□□ 2.01
TMEM260-214ENST00000556975 MAPKAPK5Q8IW41 473 aa27.6■■■□□ 2.01
TMEM260-214ENST00000556975 MAGEB6Q8N7X4 407 aa27.6■■■□□ 2.01
TMEM260-214ENST00000556975 CAP2P40123 477 aa27.59■■■□□ 2.01
TMEM260-214ENST00000556975 TBC1D2Q9BYX2 928 aa27.59■■■□□ 2.01
TMEM260-214ENST00000556975 ADGRA2Q96PE1 1338 aa27.59■■■□□ 2.01
TMEM260-214ENST00000556975 HTTP42858 3142 aa27.58■■■□□ 2.01
TMEM260-214ENST00000556975 LACTBP83111 547 aaPredicted RBP27.58■■■□□ 2.01
TMEM260-214ENST00000556975 SLC45A1Q9Y2W3 748 aa27.58■■■□□ 2.01
TMEM260-214ENST00000556975 PTPRFP10586 1907 aa27.57■■■□□ 2
TMEM260-214ENST00000556975 RRP1BQ14684 758 aaKnown RBP27.57■■■□□ 2
TMEM260-214ENST00000556975 KIF22Q14807 665 aa27.57■■■□□ 2
TMEM260-214ENST00000556975 PARK7Q99497 189 aaKnown RBP27.57■■■□□ 2
TMEM260-214ENST00000556975 SIPA1L1O43166 1804 aa27.57■■■□□ 2
TMEM260-214ENST00000556975 GNRH1P01148 92 aa27.56■■■□□ 2
TMEM260-214ENST00000556975 MIGA1Q8NAN2 632 aa27.56■■■□□ 2
TMEM260-214ENST00000556975 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.56■■■□□ 2
TMEM260-214ENST00000556975 CPA4Q9UI42 421 aa27.56■■■□□ 2
TMEM260-214ENST00000556975 PALD1Q9ULE6 856 aa27.56■■■□□ 2
TMEM260-214ENST00000556975 TRIM75PA6NK02 468 aa27.54■■■□□ 2
TMEM260-214ENST00000556975 GADL1Q6ZQY3 521 aa27.54■■■□□ 2
TMEM260-214ENST00000556975 CCDC84Q86UT8 332 aaPredicted RBP27.54■■■□□ 2
TMEM260-214ENST00000556975 ARMC5Q96C12 935 aa27.54■■■□□ 2
TMEM260-214ENST00000556975 RIOK1Q9BRS2 568 aaKnown RBP27.54■■■□□ 2
TMEM260-214ENST00000556975 ARHGAP39Q9C0H5 1083 aa27.54■■■□□ 2
TMEM260-214ENST00000556975 DNAJC18Q9H819 358 aa27.54■■■□□ 2
TMEM260-214ENST00000556975 USP17L5A8MUK1 530 aa27.53■■■□□ 2
TMEM260-214ENST00000556975 ATP5JP18859 108 aa27.53■■■□□ 2
TMEM260-214ENST00000556975 ZNF280CQ8ND82 737 aa27.53■■■□□ 2
TMEM260-214ENST00000556975 LRRCC1Q9C099 1032 aa27.53■■■□□ 2
TMEM260-214ENST00000556975 GINM1Q9NU53 330 aa27.53■■■□□ 2
TMEM260-214ENST00000556975 ATAD5Q96QE3 1844 aa27.53■■■□□ 2
TMEM260-214ENST00000556975 HLA-DOAP06340 250 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 CYP2C8P10632 490 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 BCRP11274 1271 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 PRMT2P55345 433 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 SPP2Q13103 211 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 SLC9C2Q5TAH2 1124 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 CRACR2BQ8N4Y2 399 aaPredicted RBP27.52■■■□□ 2
TMEM260-214ENST00000556975 PROCA1Q8NCQ7 364 aaPredicted RBP27.52■■■□□ 2
TMEM260-214ENST00000556975 AGTPBP1Q9UPW5 1226 aa27.52■■■□□ 2
TMEM260-214ENST00000556975 GOLIM4O00461 696 aa27.51■■□□□ 1.99
TMEM260-214ENST00000556975 ASNSP08243 561 aa27.51■■□□□ 1.99
TMEM260-214ENST00000556975 PDE6AP16499 860 aa27.51■■□□□ 1.99
TMEM260-214ENST00000556975 USP5P45974 858 aa27.51■■□□□ 1.99
TMEM260-214ENST00000556975 DNAJC2Q99543 621 aaKnown RBP27.51■■□□□ 1.99
TMEM260-214ENST00000556975 WDR18Q9BV38 432 aa27.51■■□□□ 1.99
TMEM260-214ENST00000556975 AS3MTQ9HBK9 375 aa27.51■■□□□ 1.99
TMEM260-214ENST00000556975 SAP30BPQ9UHR5 308 aaKnown RBP27.51■■□□□ 1.99
TMEM260-214ENST00000556975 MYH1P12882 1939 aa27.5■■□□□ 1.99
TMEM260-214ENST00000556975 SH3D19Q5HYK7 790 aa27.5■■□□□ 1.99
TMEM260-214ENST00000556975 TRIM34Q9BYJ4 488 aa27.5■■□□□ 1.99
TMEM260-214ENST00000556975 BOLA2Q9H3K6 86 aa27.5■■□□□ 1.99
TMEM260-214ENST00000556975 DCTPP1Q9H773 170 aa27.5■■□□□ 1.99
TMEM260-214ENST00000556975 PTCH2Q9Y6C5 1203 aa27.5■■□□□ 1.99
TMEM260-214ENST00000556975 KIAA0100Q14667 2235 aaKnown RBP27.5■■□□□ 1.99
TMEM260-214ENST00000556975 MAGEB6P1A0A0J9YX57 407 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 TCRBV5S4A2TA0A5A2 114 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 CTGFP29279 349 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 PSMC4P43686 418 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 HAUS7Q99871 368 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 BCL11AQ9H165 835 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 EHD4Q9H223 541 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 PAG1Q9NWQ8 432 aa27.49■■□□□ 1.99
TMEM260-214ENST00000556975 ZNF532Q9HCE3 1301 aa27.48■■□□□ 1.99
TMEM260-214ENST00000556975 CENPFP49454 3210 aa27.48■■□□□ 1.99
TMEM260-214ENST00000556975 JAG1P78504 1218 aa27.48■■□□□ 1.99
TMEM260-214ENST00000556975 EDC3Q96F86 508 aaKnown RBP27.48■■□□□ 1.99
TMEM260-214ENST00000556975 ZSWIM8A7E2V4 1837 aa27.48■■□□□ 1.99
TMEM260-214ENST00000556975 TATDN1Q6P1N9 297 aa27.47■■□□□ 1.99
TMEM260-214ENST00000556975 NBPF11Q86T75 865 aa27.47■■□□□ 1.99
TMEM260-214ENST00000556975 TTC6Q86TZ1 520 aa27.47■■□□□ 1.99
TMEM260-214ENST00000556975 TRIM47Q96LD4 638 aa27.47■■□□□ 1.99
TMEM260-214ENST00000556975 HOXD10P28358 340 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 SLC9C1Q4G0N8 1177 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 TREML2Q5T2D2 321 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 ZNF333Q96JL9 665 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 SRRDQ9UH36 339 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 SERPINB13Q9UIV8 391 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 PNMA3Q9UL41 463 aa27.46■■□□□ 1.99
TMEM260-214ENST00000556975 LOC285556D6RIA3 1793 aa27.45■■□□□ 1.99
TMEM260-214ENST00000556975 SMARCA5O60264 1052 aaPredicted RBP27.45■■□□□ 1.98
TMEM260-214ENST00000556975 HMGCS2P54868 508 aa27.45■■□□□ 1.98
TMEM260-214ENST00000556975 BACE1P56817 501 aa27.45■■□□□ 1.98
TMEM260-214ENST00000556975 CRNKL1Q9BZJ0 848 aaKnown RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms