RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 BICC1Q9H694 974 aaKnown RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 TRMT112Q9UI30 125 aaKnown RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 NUP98P52948 1817 aa6.62□□□□□ -1.35
ATXN3-244ENST00000556898 AFDNP55196 1824 aaKnown RBP6.62□□□□□ -1.35
ATXN3-244ENST00000556898 ABCC12Q96J65 1359 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 PASKQ96RG2 1323 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 CACNA1FO60840 1977 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 GPR25O00155 361 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 C21orf2O43822 256 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 DDNO94850 711 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 PCCAP05165 728 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 GNAI3P08754 354 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 PDE6BP35913 854 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 RGS19P49795 217 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 RNF144AP50876 292 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 FOXO4P98177 505 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 ATP8B2P98198 1209 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 MAP2K1Q02750 393 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 TRIM28Q13263 835 aaKnown RBP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 DBN1Q16643 649 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 ERICH6BQ5W0A0 696 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 PPP1R42Q7Z4L9 355 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 KLHDC4Q8TBB5 520 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 UTP14AQ9BVJ6 771 aaKnown RBP6.61□□□□□ -1.35
ATXN3-244ENST00000556898 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 ZNF652Q9Y2D9 606 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 ANKRD36CQ5JPF3 1778 aa6.61□□□□□ -1.35
ATXN3-244ENST00000556898 CARMIL3Q8ND23 1372 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 KIF13BQ9NQT8 1826 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 RASSF10A6NK89 507 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 CCDC85CA6NKD9 419 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 ZBBXA8MT70 800 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 IRS4O14654 1257 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 RAD21O60216 631 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 ITGB2P05107 769 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 FBXO45P0C2W1 286 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 HSPA8P11142 646 aaKnown RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 KANK3Q6NY19 840 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 LMBR1LQ6UX01 489 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 CLEC4GQ6UXB4 293 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 SLC51AQ86UW1 340 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 ZBTB38Q8NAP3 1195 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 CNKSR1Q969H4 720 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 ZNF837Q96EG3 531 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 BCL11AQ9H165 835 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 TAF1DQ9H5J8 278 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 PA2G4Q9UQ80 394 aaKnown RBP6.6□□□□□ -1.35
ATXN3-244ENST00000556898 CHMP3Q9Y3E7 222 aa6.6□□□□□ -1.35
ATXN3-244ENST00000556898 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 COL4A1P02462 1669 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 SH3TC1Q8TE82 1336 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 CNTNAP5Q8WYK1 1306 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 CDHR2Q9BYE9 1310 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 SRGAP3O43295 1099 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 SMARCA5O60264 1052 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-244ENST00000556898 RFX5P48382 616 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-244ENST00000556898 NR1H3Q13133 447 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 RABL6Q3YEC7 729 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-244ENST00000556898 PARP10Q53GL7 1025 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 PRR5LQ6MZQ0 368 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 NBPF5PQ86XG9 351 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-244ENST00000556898 RPAP2Q8IXW5 612 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-244ENST00000556898 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 SEC31BQ9NQW1 1179 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 EXOC6BQ9Y2D4 811 aa6.59□□□□□ -1.35
ATXN3-244ENST00000556898 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-244ENST00000556898 TNRC6CQ9HCJ0 1690 aaKnown RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 WDR33Q9C0J8 1336 aaKnown RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 PCNTO95613 3336 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 PDE8AO60658 829 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 GTF2E1P29083 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 ABL2P42684 1182 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 POU4F2Q12837 409 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 HDAC1Q13547 482 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 PNMA8AQ86V59 439 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 CNTROBQ8N137 903 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 TTLL11Q8NHH1 800 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 SSH3Q8TE77 659 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 PUS3Q9BZE2 481 aaKnown RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 CHMP4BQ9H444 224 aaKnown RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 RWDD1Q9H446 243 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-244ENST00000556898 GREM2Q9H772 168 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 HACL1Q9UJ83 578 aa6.58□□□□□ -1.36
ATXN3-244ENST00000556898 IBTKQ9P2D0 1353 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-244ENST00000556898 DDX60Q8IY21 1712 aaKnown RBP6.57□□□□□ -1.36
ATXN3-244ENST00000556898 A0A1W2PRU2 124 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 MEN1O00255 615 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 SURF6O75683 361 aaKnown RBP6.57□□□□□ -1.36
ATXN3-244ENST00000556898 IGHA1P01876 353 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 CSF1RP07333 972 aa6.57□□□□□ -1.36
ATXN3-244ENST00000556898 EPHX2P34913 555 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms