RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 SPP2Q13103 211 aa11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 SLF2Q8IX21 1173 aa11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 C7orf61Q8IZ16 206 aa11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 ZMYND8Q9ULU4 1186 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-227ENST00000556897 MROH7-TTC4A0A0A0MT08 1334 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 GPR75-ASB3A0A0A6YYF3 556 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 TBC1D12O60347 775 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 HMGCS2P54868 508 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 RHBDL3P58872 404 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 MECOMQ03112 1051 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 TRIM32Q13049 653 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 SPTY2D1Q68D10 685 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 ZNF280CQ8ND82 737 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 GDF15Q99988 308 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 SMC4Q9NTJ3 1288 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 GJD2Q9UKL4 321 aa11.2□□□□□ -0.62
HNRNPC-227ENST00000556897 PDS5AQ29RF7 1337 aaKnown RBP11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 RPTORQ8N122 1335 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 E9PSI1 815 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 SYN1P17600 705 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 BMP8BP34820 402 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 XAGE2Q96GT9 111 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 OSBPL5Q9H0X9 879 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 COPRSQ9NQ92 184 aa11.19□□□□□ -0.62
HNRNPC-227ENST00000556897 A0A1B0GUL7 405 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 CAP2P40123 477 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 ALDH1L2Q3SY69 923 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 Q7L0L9 218 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 DEFB123Q8N688 67 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 TRIB2Q92519 343 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 C11orf49Q9H6J7 331 aa11.18□□□□□ -0.62
HNRNPC-227ENST00000556897 PEX10O60683 326 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 CYP2B6P20813 491 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 MAGEA10P43363 369 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 SLFN5Q08AF3 891 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 TFCP2Q12800 502 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 PABPC4Q13310 644 aaKnown RBP eCLIP11.17□□□□□ -0.629e-62■□□□□ 10
HNRNPC-227ENST00000556897 MVPQ14764 893 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 PI16Q6UXB8 463 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 TBC1D9Q6ZT07 1266 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 MEIS3Q99687 375 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 HMG20BQ9P0W2 317 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 NOB1Q9ULX3 412 aaKnown RBP11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 LOC285556D6RIA3 1793 aa11.17□□□□□ -0.62
HNRNPC-227ENST00000556897 DDX60LQ5H9U9 1706 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 USP17L5A8MUK1 530 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 IRX3P78415 501 aaPredicted RBP11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 GSTO1P78417 241 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 MTMR2Q13614 643 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 LRIT3Q3SXY7 679 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 SH3D19Q5HYK7 790 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 TDHQ8IZJ6 230 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 SPATA5Q8NB90 893 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 NEUROD6Q96NK8 337 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 TBC1D2Q9BYX2 928 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 RAI14Q9P0K7 980 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 MORF4L1Q9UBU8 362 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 HDAC5Q9UQL6 1122 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 AKAP2Q9Y2D5 859 aa11.16□□□□□ -0.62
HNRNPC-227ENST00000556897 PFASO15067 1338 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 COL2A1P02458 1487 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 ATAD5Q96QE3 1844 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 SRGAP3O43295 1099 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 MAP4K4O95819 1239 aaPredicted RBP11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 LDHCP07864 332 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 MAP3K21Q5TCX8 1036 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 TEX11Q8IYF3 940 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 UBE2OQ9C0C9 1292 aaKnown RBP11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 TXNRD2Q9NNW7 524 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 STXBP5LQ9Y2K9 1186 aa11.15□□□□□ -0.62
HNRNPC-227ENST00000556897 UNC80Q8N2C7 3258 aa11.15□□□□□ -0.63
HNRNPC-227ENST00000556897 PLXNB2O15031 1838 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 BACE1P56817 501 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 JAG1P78504 1218 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 GORABQ5T7V8 394 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 GPRC5AQ8NFJ5 357 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 SH3RF3Q8TEJ3 882 aaPredicted RBP11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 SOCS4Q8WXH5 440 aa11.14□□□□□ -0.63
HNRNPC-227ENST00000556897 P2RX7Q99572 595 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms