RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 PPIL2Q13356 520 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 SCYL3Q8IZE3 742 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 LNPKQ9C0E8 428 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 PUS7LQ9H0K6 701 aaKnown RBP12.97□□□□□ -0.33
GABRB3-211ENST00000556636 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.33
GABRB3-211ENST00000556636 SAP30BPQ9UHR5 308 aaKnown RBP12.97□□□□□ -0.33
GABRB3-211ENST00000556636 KCNH4Q9UQ05 1017 aa12.97□□□□□ -0.33
GABRB3-211ENST00000556636 ERC2O15083 957 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 PRKAB2O43741 272 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 PTPRAP18433 802 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 USP5P45974 858 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 PLCD1P51178 756 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 JAG1P78504 1218 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 MOGSQ13724 837 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 CHD1LQ86WJ1 897 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.33
GABRB3-211ENST00000556636 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.33
GABRB3-211ENST00000556636 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
GABRB3-211ENST00000556636 DOCK2Q92608 1830 aa12.96□□□□□ -0.33
GABRB3-211ENST00000556636 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 OTOFQ9HC10 1997 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 CCL15-CCL14A0A0B4J2E2 113 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 MBD4O95243 580 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 CAP2P40123 477 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 EVX2Q03828 476 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 CCL15Q16663 113 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 FAM43AQ8N2R8 423 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 SDR42E1Q8WUS8 393 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 CRNKL1Q9BZJ0 848 aaKnown RBP12.95□□□□□ -0.34
GABRB3-211ENST00000556636 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.95□□□□□ -0.34
GABRB3-211ENST00000556636 AFG3L2Q9Y4W6 797 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 ZHX2Q9Y6X8 837 aa12.95□□□□□ -0.34
GABRB3-211ENST00000556636 CXCL11O14625 94 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
GABRB3-211ENST00000556636 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 GABPAQ06546 454 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 SNAPC2Q13487 334 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 SHROOM1Q2M3G4 852 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-211ENST00000556636 SLC4A8Q2Y0W8 1093 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 NOM1Q5C9Z4 860 aaKnown RBP12.94□□□□□ -0.34
GABRB3-211ENST00000556636 ZSCAN25Q6NSZ9 544 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 CCDC84Q86UT8 332 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-211ENST00000556636 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
GABRB3-211ENST00000556636 ZBTB47Q9UFB7 747 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-211ENST00000556636 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
GABRB3-211ENST00000556636 BTBD19C9JJ37 291 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 SMIM22K7EJ46 135 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 GPR25O00155 361 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 CETPP11597 493 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 GPAT2Q6NUI2 795 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 TATDN1Q6P1N9 297 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 APPBP2Q92624 585 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 EHD4Q9H223 541 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 OSBPL3Q9H4L5 887 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 PICK1Q9NRD5 415 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 ATP8A2Q9NTI2 1148 aa12.93□□□□□ -0.34
GABRB3-211ENST00000556636 HLA-DOAP06340 250 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-211ENST00000556636 CYP2D6P10635 497 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 CRHR2Q13324 411 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 OTUD7BQ6GQQ9 843 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 TTC6Q86TZ1 520 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-211ENST00000556636 SEC62Q99442 399 aaKnown RBP12.92□□□□□ -0.34
GABRB3-211ENST00000556636 MCM9Q9NXL9 1143 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 SERPINB13Q9UIV8 391 aa12.92□□□□□ -0.34
GABRB3-211ENST00000556636 SIPA1L1O43166 1804 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 A0A0G2JLL6 359 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-211ENST00000556636 GSG1L2A8MUP6 293 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 M0R2C6 588 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-211ENST00000556636 PDE4AP27815 886 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 SHMT1P34896 483 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 ZMYM1Q5SVZ6 1142 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 C12orf60Q5U649 245 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 PRRT2Q7Z6L0 340 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-211ENST00000556636 TNS4Q8IZW8 715 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 CRACR2BQ8N4Y2 399 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-211ENST00000556636 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
GABRB3-211ENST00000556636 CYP2D7A0A087X1C5 515 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 USP17L5A8MUK1 530 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 USP17L12C9JPN9 530 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 USP17L21D6R901 530 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 GPAA1O43292 621 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 CAP1Q01518 475 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 SPP2Q13103 211 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 CTR9Q6PD62 1173 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 EVI5LQ96CN4 794 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 ZCCHC17Q9NP64 241 aaKnown RBP12.9□□□□□ -0.34
GABRB3-211ENST00000556636 CDK5RAP2Q96SN8 1893 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
GABRB3-211ENST00000556636 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 GDF11O95390 407 aa12.89□□□□□ -0.35
GABRB3-211ENST00000556636 ASNSP08243 561 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms