RNA–Protein interactions for RNA: ENST00000556436.1

SRSF5-214, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-214ENST00000556436 CYP4F22Q6NT55 531 aa15.73■□□□□ 0.11
SRSF5-214ENST00000556436 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.73■□□□□ 0.11
SRSF5-214ENST00000556436 HOOK2Q96ED9 719 aa15.73■□□□□ 0.11
SRSF5-214ENST00000556436 DHX36Q9H2U1 1008 aaKnown RBP15.73■□□□□ 0.11
SRSF5-214ENST00000556436 CCDC171Q6TFL3 1326 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 HIP1O00291 1037 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 GNAT2P19087 354 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 VGLL4Q14135 290 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 DEFB115Q30KQ5 88 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 RGMBQ6NW40 437 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 PAXIP1Q6ZW49 1069 aaPredicted RBP15.72■□□□□ 0.11
SRSF5-214ENST00000556436 METTL16Q86W50 562 aaKnown RBP15.72■□□□□ 0.11
SRSF5-214ENST00000556436 RASAL3Q86YV0 1011 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 ZKSCAN4Q969J2 545 aaPredicted RBP15.72■□□□□ 0.11
SRSF5-214ENST00000556436 HHIPL1Q96JK4 782 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
SRSF5-214ENST00000556436 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 ZNF112Q9UJU3 913 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 SNCAIPQ9Y6H5 919 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 LAMA4Q16363 1823 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 PHIPQ8WWQ0 1821 aa15.72■□□□□ 0.11
SRSF5-214ENST00000556436 FAM155AB1AL88 458 aaPredicted RBP15.71■□□□□ 0.11
SRSF5-214ENST00000556436 USP17L12C9JPN9 530 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 USP17L21D6R901 530 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 TBC1D12O60347 775 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 VEGFBP49765 207 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 SHROOM1Q2M3G4 852 aaPredicted RBP15.71■□□□□ 0.11
SRSF5-214ENST00000556436 CTR9Q6PD62 1173 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 DNAJC5GQ8N7S2 189 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 CNKSR2Q8WXI2 1034 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 CAPNS2Q96L46 248 aa15.71■□□□□ 0.11
SRSF5-214ENST00000556436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.71■□□□□ 0.11
SRSF5-214ENST00000556436 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.71■□□□□ 0.11
SRSF5-214ENST00000556436 PATL2C9JE40 543 aaKnown RBP15.7■□□□□ 0.1
SRSF5-214ENST00000556436 POLR3DP05423 398 aaPredicted RBP15.7■□□□□ 0.1
SRSF5-214ENST00000556436 SLC10A3P09131 477 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 GJA5P36382 358 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 TDO2P48775 406 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 ZNF157P51786 506 aaPredicted RBP15.7■□□□□ 0.1
SRSF5-214ENST00000556436 MAP3K9P80192 1104 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 GABPAQ06546 454 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 GRM1Q13255 1194 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 GIMAP6Q6P9H5 292 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 ANKRD13AQ8IZ07 590 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 IFNL3Q8IZI9 196 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 SLC44A5Q8NCS7 719 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 DYNLL2Q96FJ2 89 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 EHD4Q9H223 541 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 ELP3Q9H9T3 547 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 HERC5Q9UII4 1024 aaKnown RBP15.7■□□□□ 0.1
SRSF5-214ENST00000556436 SERPINB13Q9UIV8 391 aa15.7■□□□□ 0.1
SRSF5-214ENST00000556436 RAD50Q92878 1312 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 PTPRFP10586 1907 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 AOC2O75106 756 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 APPP05067 770 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 HSPD1P10809 573 aaKnown RBP15.69■□□□□ 0.1
SRSF5-214ENST00000556436 JAG1P78504 1218 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 NOL9Q5SY16 702 aaKnown RBP15.69■□□□□ 0.1
SRSF5-214ENST00000556436 C12orf60Q5U649 245 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 TTC6Q86TZ1 520 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
SRSF5-214ENST00000556436 ZIC5Q96T25 663 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 ARPP21Q9UBL0 812 aaPredicted RBP15.69■□□□□ 0.1
SRSF5-214ENST00000556436 ROBO3Q96MS0 1386 aa15.69■□□□□ 0.1
SRSF5-214ENST00000556436 SHMT1P34896 483 aa15.68■□□□□ 0.1
SRSF5-214ENST00000556436 MKRN3Q13064 507 aaKnown RBP15.68■□□□□ 0.1
SRSF5-214ENST00000556436 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
SRSF5-214ENST00000556436 CCDC84Q86UT8 332 aaPredicted RBP15.68■□□□□ 0.1
SRSF5-214ENST00000556436 FOXP4Q8IVH2 680 aaPredicted RBP15.68■□□□□ 0.1
SRSF5-214ENST00000556436 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
SRSF5-214ENST00000556436 WNK4Q96J92 1243 aa15.68■□□□□ 0.1
SRSF5-214ENST00000556436 NAPBQ9H115 298 aa15.68■□□□□ 0.1
SRSF5-214ENST00000556436 CSADQ9Y600 493 aa15.68■□□□□ 0.1
SRSF5-214ENST00000556436 WDR33Q9C0J8 1336 aaKnown RBP15.68■□□□□ 0.1
SRSF5-214ENST00000556436 GREB1LQ9C091 1923 aaPredicted RBP15.67■□□□□ 0.1
SRSF5-214ENST00000556436 SGSM2O43147 1006 aa15.67■□□□□ 0.1
SRSF5-214ENST00000556436 GDF11O95390 407 aa15.67■□□□□ 0.1
SRSF5-214ENST00000556436 SCYL3Q8IZE3 742 aa15.67■□□□□ 0.1
SRSF5-214ENST00000556436 SLC10A4Q96EP9 437 aa15.67■□□□□ 0.1
SRSF5-214ENST00000556436 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
SRSF5-214ENST00000556436 GTF3C3Q9Y5Q9 886 aa15.67■□□□□ 0.1
SRSF5-214ENST00000556436 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 UNCXA6NJT0 531 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 MINDY4BA8MYZ0 360 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 CAP2P40123 477 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 ALX1Q15699 326 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 SPRYD7Q5W111 196 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 TATDN1Q6P1N9 297 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 C16orf86Q6ZW13 317 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 STK11IPQ8N1F8 1099 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 OPTNQ96CV9 577 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 OTUD5Q96G74 571 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 ESYT1Q9BSJ8 1104 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 NACAP1Q9BZK3 213 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 TACC3Q9Y6A5 838 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 ZMYM6O95789 1325 aa15.66■□□□□ 0.1
SRSF5-214ENST00000556436 CTNND1O60716 968 aaKnown RBP15.65■□□□□ 0.1
SRSF5-214ENST00000556436 CDC45O75419 566 aa15.65■□□□□ 0.1
SRSF5-214ENST00000556436 FGAP02671 866 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms