RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PLCG2P16885 1265 aa27.66■■■□□ 2.02
ACTN1-220ENST00000556433 PPP4CP60510 307 aa27.66■■■□□ 2.02
ACTN1-220ENST00000556433 PIH1D3Q9NQM4 214 aaKnown RBP27.66■■■□□ 2.02
ACTN1-220ENST00000556433 SLC45A1Q9Y2W3 748 aa27.66■■■□□ 2.02
ACTN1-220ENST00000556433 OSBPP22059 807 aa27.65■■■□□ 2.02
ACTN1-220ENST00000556433 PI4KBQ9UBF8 816 aa27.65■■■□□ 2.02
ACTN1-220ENST00000556433 ZSWIM8A7E2V4 1837 aa27.64■■■□□ 2.02
ACTN1-220ENST00000556433 COL2A1P02458 1487 aaPredicted RBP27.64■■■□□ 2.02
ACTN1-220ENST00000556433 IGSF3O75054 1194 aa27.64■■■□□ 2.02
ACTN1-220ENST00000556433 ADGRA1Q86SQ6 560 aa27.64■■■□□ 2.02
ACTN1-220ENST00000556433 TGFBRAP1Q8WUH2 860 aa27.64■■■□□ 2.02
ACTN1-220ENST00000556433 EXOC6BQ9Y2D4 811 aa27.64■■■□□ 2.02
ACTN1-220ENST00000556433 MS4A1P11836 297 aa27.63■■■□□ 2.01
ACTN1-220ENST00000556433 CAP2P40123 477 aa27.63■■■□□ 2.01
ACTN1-220ENST00000556433 FCGRTP55899 365 aa27.63■■■□□ 2.01
ACTN1-220ENST00000556433 SPP2Q13103 211 aa27.63■■■□□ 2.01
ACTN1-220ENST00000556433 MAPKAPK5Q8IW41 473 aa27.63■■■□□ 2.01
ACTN1-220ENST00000556433 RAET1EQ8TD07 263 aa27.63■■■□□ 2.01
ACTN1-220ENST00000556433 DHX36Q9H2U1 1008 aaKnown RBP27.63■■■□□ 2.01
ACTN1-220ENST00000556433 HERC5Q9UII4 1024 aaKnown RBP27.63■■■□□ 2.01
ACTN1-220ENST00000556433 RRP1BQ14684 758 aaKnown RBP27.62■■■□□ 2.01
ACTN1-220ENST00000556433 ERC1Q8IUD2 1116 aa27.62■■■□□ 2.01
ACTN1-220ENST00000556433 ZNF280CQ8ND82 737 aa27.62■■■□□ 2.01
ACTN1-220ENST00000556433 AGTPBP1Q9UPW5 1226 aa27.62■■■□□ 2.01
ACTN1-220ENST00000556433 CYP7A1P22680 504 aa27.61■■■□□ 2.01
ACTN1-220ENST00000556433 SMCR8Q8TEV9 937 aaPredicted RBP27.61■■■□□ 2.01
ACTN1-220ENST00000556433 DOCK1Q14185 1865 aa27.61■■■□□ 2.01
ACTN1-220ENST00000556433 MYPNQ86TC9 1320 aa27.61■■■□□ 2.01
ACTN1-220ENST00000556433 IDH1O75874 414 aaKnown RBP27.6■■■□□ 2.01
ACTN1-220ENST00000556433 AACSQ86V21 672 aa27.6■■■□□ 2.01
ACTN1-220ENST00000556433 TBC1D2Q9BYX2 928 aa27.6■■■□□ 2.01
ACTN1-220ENST00000556433 USP17L5A8MUK1 530 aa27.59■■■□□ 2.01
ACTN1-220ENST00000556433 DYNLL1P63167 89 aaKnown RBP27.59■■■□□ 2.01
ACTN1-220ENST00000556433 TREML2Q5T2D2 321 aa27.59■■■□□ 2.01
ACTN1-220ENST00000556433 FOXP4Q8IVH2 680 aaPredicted RBP27.59■■■□□ 2.01
ACTN1-220ENST00000556433 FLT1P17948 1338 aa27.59■■■□□ 2.01
ACTN1-220ENST00000556433 GRK4P32298 578 aa27.58■■■□□ 2.01
ACTN1-220ENST00000556433 HSP90AB4PQ58FF6 505 aa27.58■■■□□ 2.01
ACTN1-220ENST00000556433 PROCA1Q8NCQ7 364 aaPredicted RBP27.58■■■□□ 2.01
ACTN1-220ENST00000556433 PALD1Q9ULE6 856 aa27.58■■■□□ 2.01
ACTN1-220ENST00000556433 NDUFB9Q9Y6M9 179 aa27.58■■■□□ 2.01
ACTN1-220ENST00000556433 RBBP6Q7Z6E9 1792 aaKnown RBP27.58■■■□□ 2
ACTN1-220ENST00000556433 CENPFP49454 3210 aa27.57■■■□□ 2
ACTN1-220ENST00000556433 PRKCZQ05513 592 aa27.57■■■□□ 2
ACTN1-220ENST00000556433 TRIM34Q9BYJ4 488 aa27.57■■■□□ 2
ACTN1-220ENST00000556433 AS3MTQ9HBK9 375 aa27.57■■■□□ 2
ACTN1-220ENST00000556433 PNMA3Q9UL41 463 aa27.57■■■□□ 2
ACTN1-220ENST00000556433 PHIPQ8WWQ0 1821 aa27.57■■■□□ 2
ACTN1-220ENST00000556433 HMGCS2P54868 508 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 MTFR1Q15390 333 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 CRACR2BQ8N4Y2 399 aaPredicted RBP27.56■■■□□ 2
ACTN1-220ENST00000556433 MAGEB6Q8N7X4 407 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 RHPN1Q8TCX5 695 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 ANTXR1Q9H6X2 564 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 IL1RAPL2Q9NP60 686 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 PCDH10Q9P2E7 1040 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 BIN2Q9UBW5 565 aaPredicted RBP27.56■■■□□ 2
ACTN1-220ENST00000556433 SAP30BPQ9UHR5 308 aaKnown RBP27.56■■■□□ 2
ACTN1-220ENST00000556433 GABRQQ9UN88 632 aa27.56■■■□□ 2
ACTN1-220ENST00000556433 METTL16Q86W50 562 aaKnown RBP27.55■■■□□ 2
ACTN1-220ENST00000556433 ANKRD13CQ8N6S4 541 aa27.55■■■□□ 2
ACTN1-220ENST00000556433 MIGA1Q8NAN2 632 aa27.55■■■□□ 2
ACTN1-220ENST00000556433 COG6Q9Y2V7 657 aa27.55■■■□□ 2
ACTN1-220ENST00000556433 MAP3K12Q12852 859 aa27.54■■■□□ 2
ACTN1-220ENST00000556433 PABPC4Q13310 644 aaKnown RBP eCLIP27.54■■■□□ 2
ACTN1-220ENST00000556433 RPAP2Q8IXW5 612 aaPredicted RBP27.54■■■□□ 2
ACTN1-220ENST00000556433 DNAJC18Q9H819 358 aa27.54■■■□□ 2
ACTN1-220ENST00000556433 DDX19BQ9UMR2 479 aa27.54■■■□□ 2
ACTN1-220ENST00000556433 PTPRFP10586 1907 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 APBB1O00213 710 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 TNPO2O14787 897 aaKnown RBP27.53■■■□□ 2
ACTN1-220ENST00000556433 HLA-DOAP06340 250 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 ASNSP08243 561 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 JAG1P78504 1218 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 SH3D19Q5HYK7 790 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 WDR18Q9BV38 432 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 MAST2Q6P0Q8 1798 aa27.53■■■□□ 2
ACTN1-220ENST00000556433 USP5P45974 858 aa27.52■■■□□ 2
ACTN1-220ENST00000556433 FLT3LGP49771 235 aa27.52■■■□□ 2
ACTN1-220ENST00000556433 CERS3Q8IU89 383 aa27.52■■■□□ 2
ACTN1-220ENST00000556433 ZBTB40Q9NUA8 1239 aa27.52■■■□□ 2
ACTN1-220ENST00000556433 MYO5AQ9Y4I1 1855 aaKnown RBP27.52■■■□□ 2
ACTN1-220ENST00000556433 HMMRO75330 724 aa27.51■■□□□ 1.99
ACTN1-220ENST00000556433 GDF11O95390 407 aa27.51■■□□□ 1.99
ACTN1-220ENST00000556433 UBXN2AP68543 259 aa27.51■■□□□ 1.99
ACTN1-220ENST00000556433 CLASRPQ8N2M8 674 aaKnown RBP27.51■■□□□ 1.99
ACTN1-220ENST00000556433 SLAIN1Q8ND83 568 aa27.51■■□□□ 1.99
ACTN1-220ENST00000556433 ADCY3O60266 1144 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 CCL5P13501 91 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 GCLCP48506 637 aaPredicted RBP27.5■■□□□ 1.99
ACTN1-220ENST00000556433 BACE1P56817 501 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 MTMR2Q13614 643 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 FAM110CQ1W6H9 321 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 TMED8Q6PL24 325 aaPredicted RBP27.5■■□□□ 1.99
ACTN1-220ENST00000556433 KIF1BPQ96EK5 621 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 BCL11AQ9H165 835 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 ASCC2Q9H1I8 757 aaPredicted RBP27.5■■□□□ 1.99
ACTN1-220ENST00000556433 GINM1Q9NU53 330 aa27.5■■□□□ 1.99
ACTN1-220ENST00000556433 SHROOM1Q2M3G4 852 aaPredicted RBP27.49■■□□□ 1.99
ACTN1-220ENST00000556433 SIRT2Q8IXJ6 389 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms