RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 GSX1Q9H4S2 264 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-241ENST00000556374 LIN7BQ9HAP6 207 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 LEMD3Q9Y2U8 911 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 ZMYM3Q14202 1370 aa6.03□□□□□ -1.44
ATXN3-241ENST00000556374 WDR64B1ANS9 1081 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 B3GALT4O96024 378 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 ABL1P00519 1130 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 USP11P51784 963 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 GSTM4Q03013 218 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 PCDH1Q08174 1060 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 ECM1Q16610 540 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 SGO2Q562F6 1265 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 C2CD4AQ8NCU7 369 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-241ENST00000556374 ALKBH8Q96BT7 664 aaKnown RBP6.02□□□□□ -1.45
ATXN3-241ENST00000556374 SIN3AQ96ST3 1273 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 USP26Q9BXU7 913 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 SRCAPQ6ZRS2 3230 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 MED14O60244 1454 aa6.02□□□□□ -1.45
ATXN3-241ENST00000556374 INO80Q9ULG1 1556 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-241ENST00000556374 NPHP4O75161 1426 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-241ENST00000556374 CPNE3O75131 537 aaKnown RBP6.01□□□□□ -1.45
ATXN3-241ENST00000556374 AP3B2Q13367 1082 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 MSMPQ1L6U9 139 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 HGSNATQ68CP4 663 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 PRPF40BQ6NWY9 871 aaKnown RBP6.01□□□□□ -1.45
ATXN3-241ENST00000556374 ZAR1Q86SH2 424 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 GLYCTKQ8IVS8 523 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 DMRTB1Q96MA1 342 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 FBXL18Q96ME1 805 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 OSBPL1AQ9BXW6 950 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 C1orf115Q9H7X2 142 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 TRAK1Q9UPV9 953 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 OAS3Q9Y6K5 1087 aaKnown RBP6.01□□□□□ -1.45
ATXN3-241ENST00000556374 PHLPP1O60346 1717 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 SAMD9LQ8IVG5 1584 aa6.01□□□□□ -1.45
ATXN3-241ENST00000556374 DLGAP3O95886 979 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 F13BP05160 661 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 ADH5P11766 374 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 RXRBP28702 533 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 POU4F3Q15319 338 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 ZNF423Q2M1K9 1284 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 EFCAB2Q5VUJ9 269 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 TXNDC2Q86VQ3 553 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 AFAP1Q8N556 730 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 MFSD14AQ96MC6 490 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 LATS2Q9NRM7 1088 aa6□□□□□ -1.45
ATXN3-241ENST00000556374 ATP7AQ04656 1500 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 CDC42BPAQ5VT25 1732 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 CROCC2H7BZ55 1655 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 CDK12Q9NYV4 1490 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-241ENST00000556374 TAL1P17542 331 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-241ENST00000556374 GRIA4P48058 902 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 ARHGAP4P98171 946 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 ZNF211Q13398 564 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-241ENST00000556374 NFKBIBQ15653 356 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 CDPF1Q6NVV7 123 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 VSIG10LQ86VR7 867 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 CORO1BQ9BR76 489 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 ZNF576Q9H609 170 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 BSDC1Q9NW68 430 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-241ENST00000556374 PRKAG2Q9UGJ0 569 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 LRP5O75197 1615 aa5.99□□□□□ -1.45
ATXN3-241ENST00000556374 SETBP1Q9Y6X0 1596 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 H3BRB1 525 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 MAOBP27338 520 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 DUSP27Q5VZP5 1158 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 RBCK1Q9BYM8 510 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 TUT1Q9H6E5 874 aaKnown RBP5.98□□□□□ -1.45
ATXN3-241ENST00000556374 ACSS3Q9H6R3 686 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 ANGEL1Q9UNK9 670 aaKnown RBP5.98□□□□□ -1.45
ATXN3-241ENST00000556374 LRP6O75581 1613 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 COL16A1Q07092 1604 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-241ENST00000556374 FAM135BQ49AJ0 1406 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 SHPRHQ149N8 1683 aa5.98□□□□□ -1.45
ATXN3-241ENST00000556374 UGGT1Q9NYU2 1555 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 ROCK1Q13464 1354 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 METTL12A8MUP2 240 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 IGHA2P01877 340 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 XRCC5P13010 732 aaKnown RBP5.97□□□□□ -1.45
ATXN3-241ENST00000556374 AGBL5Q8NDL9 886 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 FBLIM1Q8WUP2 373 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 GATA6Q92908 595 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 TBC1D32Q96NH3 1257 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 EHD4Q9H223 541 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 KRT82Q9NSB4 513 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 PPP4R2Q9NY27 417 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 CCDC39Q9UFE4 941 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 ADGRE2Q9UHX3 823 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 CDK11AQ9UQ88 783 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-241ENST00000556374 SYCP2Q9BX26 1530 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 FAM135AQ9P2D6 1515 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 DAPK1P53355 1430 aa5.97□□□□□ -1.45
ATXN3-241ENST00000556374 PZPP20742 1482 aa5.96□□□□□ -1.45
ATXN3-241ENST00000556374 CYP26A1O43174 497 aa5.96□□□□□ -1.46
ATXN3-241ENST00000556374 DRD2P14416 443 aa5.96□□□□□ -1.46
ATXN3-241ENST00000556374 SEZ6L2Q6UXD5 910 aa5.96□□□□□ -1.46
ATXN3-241ENST00000556374 TRIM56Q9BRZ2 755 aaKnown RBP5.96□□□□□ -1.46
ATXN3-241ENST00000556374 RAD18Q9NS91 495 aa5.96□□□□□ -1.46
ATXN3-241ENST00000556374 RNF114Q9Y508 228 aa5.96□□□□□ -1.46
ATXN3-241ENST00000556374 ACTL7BQ9Y614 415 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms