RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 CCDC81Q6ZN84 652 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 KCT2Q8NC54 265 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 SMG8Q8ND04 991 aaKnown RBP6.5□□□□□ -1.37
CDKN3-210ENST00000556305 PMFBP1Q8TBY8 1022 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 CEP41Q9BYV8 373 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 EHMT1Q9H9B1 1298 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 ZNF408Q9H9D4 720 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 PIDD1Q9HB75 910 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 KCNK4Q9NYG8 393 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 PRKAG3Q9UGI9 489 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 USP21Q9UK80 565 aa6.5□□□□□ -1.37
CDKN3-210ENST00000556305 BTBD11A6QL63 1104 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 GFRA2O00451 464 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 FANCGO15287 622 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 SART1O43290 800 aaKnown RBP6.49□□□□□ -1.37
CDKN3-210ENST00000556305 PLCG1P19174 1290 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 CYFIP1Q7L576 1253 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.49□□□□□ -1.37
CDKN3-210ENST00000556305 ADAM30Q9UKF2 790 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 MRVI1Q9Y6F6 885 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 PRR36Q9H6K5 1346 aa6.49□□□□□ -1.37
CDKN3-210ENST00000556305 C9orf172C9J069 976 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 FAM229AH3BQW9 127 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 HTR3BO95264 441 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 PGRP06401 933 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 ADH5P11766 374 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 GIPRP48546 466 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 CLCQ05315 142 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 INPP5AQ14642 412 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 CDC37L1Q7L3B6 337 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 C12orf40Q86WS4 652 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 TMEM130Q8N3G9 435 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 C12orf50Q8NA57 414 aaPredicted RBP6.48□□□□□ -1.37
CDKN3-210ENST00000556305 RBBP8NLQ8NC74 664 aaPredicted RBP6.48□□□□□ -1.37
CDKN3-210ENST00000556305 ZNF507Q8TCN5 953 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 WDR89Q96FK6 387 aaPredicted RBP6.48□□□□□ -1.37
CDKN3-210ENST00000556305 SHDQ96IW2 340 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 YIPF2Q9BWQ6 316 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 WNT10AQ9GZT5 417 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 GMIPQ9P107 970 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
CDKN3-210ENST00000556305 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
CDKN3-210ENST00000556305 TMPRSS2O15393 492 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 GAS2O43903 313 aaKnown RBP6.47□□□□□ -1.37
CDKN3-210ENST00000556305 WISP1O95388 367 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 DLGAP3O95886 979 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 YARSP54577 528 aaKnown RBP6.47□□□□□ -1.37
CDKN3-210ENST00000556305 SOX4Q06945 474 aaPredicted RBP6.47□□□□□ -1.37
CDKN3-210ENST00000556305 NFE2L2Q16236 605 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 KIAA1211Q6ZU35 1233 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 ANKS3Q6ZW76 656 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 DPH6Q7L8W6 267 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 DYMQ7RTS9 669 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 RNF214Q8ND24 703 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 TM9SF2Q99805 663 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 OSBPL2Q9H1P3 480 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 AKTIPQ9H8T0 292 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 SSU72Q9NP77 194 aaKnown RBP6.47□□□□□ -1.37
CDKN3-210ENST00000556305 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 REV1Q9UBZ9 1251 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 PCDHGC5Q9Y5F6 944 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 CSADQ9Y600 493 aa6.47□□□□□ -1.37
CDKN3-210ENST00000556305 F8W735 103 aaPredicted RBP6.46□□□□□ -1.38
CDKN3-210ENST00000556305 GRK4P32298 578 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 ETFBP38117 255 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 PPM1JQ5JR12 505 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 TMEM201Q5SNT2 666 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 TMEM40Q8WWA1 233 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 LENG1Q96BZ8 264 aaPredicted RBP6.46□□□□□ -1.38
CDKN3-210ENST00000556305 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 LNPKQ9C0E8 428 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 ACTR10Q9NZ32 417 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 SIRPGQ9P1W8 387 aa6.46□□□□□ -1.38
CDKN3-210ENST00000556305 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 SMAD7O15105 426 aaKnown RBP6.45□□□□□ -1.38
CDKN3-210ENST00000556305 GLB1P16278 677 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 ASPAP45381 313 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 CDK8P49336 464 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 USP11P51784 963 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 CHMP4BP1P59074 171 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 GRIK4Q16099 956 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 LSRQ86X29 649 aaPredicted RBP6.45□□□□□ -1.38
CDKN3-210ENST00000556305 HID1Q8IV36 788 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 C19orf47Q8N9M1 422 aaKnown RBP6.45□□□□□ -1.38
CDKN3-210ENST00000556305 KLHL3Q9UH77 587 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 PPP1R9AQ9ULJ8 1098 aa6.45□□□□□ -1.38
CDKN3-210ENST00000556305 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.44□□□□□ -1.38
CDKN3-210ENST00000556305 RNGTTO60942 597 aaKnown RBP6.44□□□□□ -1.38
CDKN3-210ENST00000556305 TIAF1O95411 115 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 SELPP16109 830 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 RING1Q06587 406 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 RAB33AQ14088 237 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 PPP2R5EQ16537 467 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 UVSSAQ2YD98 709 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 SLC6A19Q695T7 634 aa6.44□□□□□ -1.38
CDKN3-210ENST00000556305 NOP9Q86U38 636 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms