RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TCHHQ07283 1943 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 NFKBIEO00221 500 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 KRT85P78386 507 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
VPS33B-205ENST00000556096 SYNE3Q6ZMZ3 975 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
VPS33B-205ENST00000556096 FER1L6Q2WGJ9 1857 aa17.19■□□□□ 0.34
VPS33B-205ENST00000556096 CYP2D7A0A087X1C5 515 aa17.19■□□□□ 0.34
VPS33B-205ENST00000556096 SH3RF3Q8TEJ3 882 aaPredicted RBP17.19■□□□□ 0.34
VPS33B-205ENST00000556096 UBAC1Q9BSL1 405 aa17.19■□□□□ 0.34
VPS33B-205ENST00000556096 ORC3Q9UBD5 711 aaPredicted RBP17.19■□□□□ 0.34
VPS33B-205ENST00000556096 LAMB1P07942 1786 aa17.19■□□□□ 0.34
VPS33B-205ENST00000556096 PLCG2P16885 1265 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 USP5P45974 858 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 PRELPP51888 382 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 UBE2HP62256 183 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 GTF2IP78347 998 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 SEC23AQ15436 765 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
VPS33B-205ENST00000556096 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
VPS33B-205ENST00000556096 GAKO14976 1311 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 MYH2Q9UKX2 1941 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 GOLGA6L3A6NEY3 463 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 GOLGA8AA7E2F4 631 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 SMIM22K7EJ46 135 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
VPS33B-205ENST00000556096 PDE4BQ07343 736 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
VPS33B-205ENST00000556096 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 STK11IPQ8N1F8 1099 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 SCAND2PQ9GZW5 306 aaPredicted RBP17.18■□□□□ 0.34
VPS33B-205ENST00000556096 FAM217BQ9NTX9 383 aaPredicted RBP17.18■□□□□ 0.34
VPS33B-205ENST00000556096 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 ELP1O95163 1332 aa17.18■□□□□ 0.34
VPS33B-205ENST00000556096 FIBPO43427 364 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 GADD45BO75293 160 aaPredicted RBP17.17■□□□□ 0.34
VPS33B-205ENST00000556096 CDC27P30260 824 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 BTDP43251 543 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 ZNF445P59923 1031 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 PPP2R5BQ15173 497 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 NTRK3Q16288 839 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 IQCA1Q86XH1 822 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 ZSCAN10Q96SZ4 725 aaPredicted RBP17.17■□□□□ 0.34
VPS33B-205ENST00000556096 ZKSCAN3Q9BRR0 538 aa17.17■□□□□ 0.34
VPS33B-205ENST00000556096 ZNF646O15015 1829 aaPredicted RBP17.17■□□□□ 0.34
VPS33B-205ENST00000556096 GRIN3BO60391 1043 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 ATL3Q6DD88 541 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 AMOTL1Q8IY63 956 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 TAOK3Q9H2K8 898 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 TNKSO95271 1327 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 ROBO3Q96MS0 1386 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 SCN9AQ15858 1988 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 RANBP6O60518 1105 aaKnown RBP17.16■□□□□ 0.34
VPS33B-205ENST00000556096 USP17L8P0C7I0 530 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 CYP2D6P10635 497 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 DOK7Q18PE1 504 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 FBXO18Q8NFZ0 1043 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
VPS33B-205ENST00000556096 C8orf76Q96K31 380 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 STK36Q9NRP7 1315 aa17.16■□□□□ 0.34
VPS33B-205ENST00000556096 G3V3G9 751 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 IFNAR1P17181 557 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 RHBDL3P58872 404 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 ZSCAN23Q3MJ62 389 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 DCAF8Q5TAQ9 597 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 FAM173BQ6P4H8 233 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 ZNF654Q8IZM8 581 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 ENAHQ8N8S7 591 aaPredicted RBP17.15■□□□□ 0.34
VPS33B-205ENST00000556096 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 TMEM63CQ9P1W3 806 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 CFAP45Q9UL16 551 aa17.15■□□□□ 0.34
VPS33B-205ENST00000556096 PRDM1O75626 825 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 RXRAP19793 462 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 IARSP41252 1262 aaKnown RBP17.14■□□□□ 0.33
VPS33B-205ENST00000556096 RTN1Q16799 776 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 AOC3Q16853 763 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 TTC6Q86TZ1 520 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 MYL10Q9BUA6 226 aa17.14■□□□□ 0.33
VPS33B-205ENST00000556096 PSME4Q14997 1843 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
VPS33B-205ENST00000556096 TEX11Q8IYF3 940 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 CERS5Q8N5B7 392 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 FANCBQ8NB91 859 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 PSMD1Q99460 953 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 DBNDD1Q9H9R9 158 aa17.13■□□□□ 0.33
VPS33B-205ENST00000556096 RBM27Q9P2N5 1060 aaKnown RBP17.13■□□□□ 0.33
VPS33B-205ENST00000556096 FMNL1O95466 1100 aaPredicted RBP17.13■□□□□ 0.33
VPS33B-205ENST00000556096 CALM1P0DP23 149 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms