RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
PCNX4-209ENST00000555569 KIAA0100Q14667 2235 aaKnown RBP16.84■□□□□ 0.29
PCNX4-209ENST00000555569 A0A0G2JLL6 359 aaPredicted RBP16.84■□□□□ 0.29
PCNX4-209ENST00000555569 APBB1O00213 710 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 LACTBP83111 547 aaPredicted RBP16.84■□□□□ 0.29
PCNX4-209ENST00000555569 GPAT2Q6NUI2 795 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 C17orf99Q6UX52 265 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 FASTKD5Q7L8L6 764 aaKnown RBP16.84■□□□□ 0.29
PCNX4-209ENST00000555569 PRRT2Q7Z6L0 340 aaPredicted RBP16.84■□□□□ 0.29
PCNX4-209ENST00000555569 MAPKAPK5Q8IW41 473 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 PI4KBQ9UBF8 816 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 CPA4Q9UI42 421 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 HERC5Q9UII4 1024 aaKnown RBP16.84■□□□□ 0.29
PCNX4-209ENST00000555569 NDUFB9Q9Y6M9 179 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 MYH1P12882 1939 aa16.84■□□□□ 0.29
PCNX4-209ENST00000555569 RAB11FIP3O75154 756 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 FLT1P17948 1338 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 DYNLL1P63167 89 aaKnown RBP16.83■□□□□ 0.28
PCNX4-209ENST00000555569 C20orf194Q5TEA3 1177 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 GADL1Q6ZQY3 521 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 ADGRA2Q96PE1 1338 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 PARK7Q99497 189 aaKnown RBP16.83■□□□□ 0.28
PCNX4-209ENST00000555569 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 ANTXR1Q9H6X2 564 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.83■□□□□ 0.28
PCNX4-209ENST00000555569 HTTP42858 3142 aa16.83■□□□□ 0.28
PCNX4-209ENST00000555569 TRIM75PA6NK02 468 aa16.82■□□□□ 0.28
PCNX4-209ENST00000555569 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
PCNX4-209ENST00000555569 MAP3K12Q12852 859 aa16.82■□□□□ 0.28
PCNX4-209ENST00000555569 CCDC84Q86UT8 332 aaPredicted RBP16.82■□□□□ 0.28
PCNX4-209ENST00000555569 MAGEB6Q8N7X4 407 aa16.82■□□□□ 0.28
PCNX4-209ENST00000555569 CAP2P40123 477 aa16.81■□□□□ 0.28
PCNX4-209ENST00000555569 TMED8Q6PL24 325 aaPredicted RBP16.81■□□□□ 0.28
PCNX4-209ENST00000555569 CERS3Q8IU89 383 aa16.81■□□□□ 0.28
PCNX4-209ENST00000555569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
PCNX4-209ENST00000555569 ARMC5Q96C12 935 aa16.81■□□□□ 0.28
PCNX4-209ENST00000555569 PTCH2Q9Y6C5 1203 aa16.81■□□□□ 0.28
PCNX4-209ENST00000555569 MGAMO43451 1857 aa16.81■□□□□ 0.28
PCNX4-209ENST00000555569 RBBP6Q7Z6E9 1792 aaKnown RBP16.8■□□□□ 0.28
PCNX4-209ENST00000555569 GNRH1P01148 92 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 CYP2C8P10632 490 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 RRP1BQ14684 758 aaKnown RBP16.8■□□□□ 0.28
PCNX4-209ENST00000555569 TTF1Q15361 905 aaPredicted RBP16.8■□□□□ 0.28
PCNX4-209ENST00000555569 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
PCNX4-209ENST00000555569 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
PCNX4-209ENST00000555569 MIGA1Q8NAN2 632 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 BCL11AQ9H165 835 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
PCNX4-209ENST00000555569 PALD1Q9ULE6 856 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 SLC45A1Q9Y2W3 748 aa16.8■□□□□ 0.28
PCNX4-209ENST00000555569 LOC285556D6RIA3 1793 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 TNRC18O15417 2968 aaPredicted RBP16.79■□□□□ 0.28
PCNX4-209ENST00000555569 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 PSMC4P43686 418 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 USP5P45974 858 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 SPP2Q13103 211 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 CRACR2BQ8N4Y2 399 aaPredicted RBP16.79■□□□□ 0.28
PCNX4-209ENST00000555569 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 TRIM34Q9BYJ4 488 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 DNAJC18Q9H819 358 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 AGTPBP1Q9UPW5 1226 aa16.79■□□□□ 0.28
PCNX4-209ENST00000555569 ECM2O94769 699 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-209ENST00000555569 HLA-DOAP06340 250 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 BCRP11274 1271 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 CTGFP29279 349 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 PRMT2P55345 433 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 SLC9C1Q4G0N8 1177 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 NBPF11Q86T75 865 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 PROCA1Q8NCQ7 364 aaPredicted RBP16.78■□□□□ 0.28
PCNX4-209ENST00000555569 TRIM47Q96LD4 638 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 DNAJC2Q99543 621 aaKnown RBP16.78■□□□□ 0.28
PCNX4-209ENST00000555569 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
PCNX4-209ENST00000555569 POTEFA5A3E0 1075 aa16.77■□□□□ 0.28
PCNX4-209ENST00000555569 GOLIM4O00461 696 aa16.77■□□□□ 0.28
PCNX4-209ENST00000555569 FMNL1O95466 1100 aaPredicted RBP16.77■□□□□ 0.28
PCNX4-209ENST00000555569 ASNSP08243 561 aa16.77■□□□□ 0.28
PCNX4-209ENST00000555569 PDE6AP16499 860 aa16.77■□□□□ 0.28
PCNX4-209ENST00000555569 HOXD10P28358 340 aa16.77■□□□□ 0.28
PCNX4-209ENST00000555569 ZNF333Q96JL9 665 aa16.77■□□□□ 0.28
PCNX4-209ENST00000555569 NAV1Q8NEY1 1877 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 HMGCS2P54868 508 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 SLC4A8Q2Y0W8 1093 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 RIOK1Q9BRS2 568 aaKnown RBP16.76■□□□□ 0.27
PCNX4-209ENST00000555569 WDR18Q9BV38 432 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 LRRCC1Q9C099 1032 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 SRRDQ9UH36 339 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 PNMA3Q9UL41 463 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 MYH7P12883 1935 aa16.76■□□□□ 0.27
PCNX4-209ENST00000555569 CENPFP49454 3210 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 MAGEB6P1A0A0J9YX57 407 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 ATP5JP18859 108 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 OSBPP22059 807 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 FCGRTP55899 365 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 JAG1P78504 1218 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 SH3D19Q5HYK7 790 aa16.75■□□□□ 0.27
PCNX4-209ENST00000555569 SMCR8Q8TEV9 937 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms