RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.77■■■□□ 2.36
PRKCH-216ENST00000555542 PI4KBQ9UBF8 816 aa29.77■■■□□ 2.36
PRKCH-216ENST00000555542 HERC5Q9UII4 1024 aaKnown RBP29.77■■■□□ 2.36
PRKCH-216ENST00000555542 AFG3L2Q9Y4W6 797 aa29.77■■■□□ 2.36
PRKCH-216ENST00000555542 FLT1P17948 1338 aa29.76■■■□□ 2.36
PRKCH-216ENST00000555542 FOCADQ5VW36 1801 aa29.76■■■□□ 2.35
PRKCH-216ENST00000555542 TRIM75PA6NK02 468 aa29.76■■■□□ 2.35
PRKCH-216ENST00000555542 DYNLL1P63167 89 aaKnown RBP29.76■■■□□ 2.35
PRKCH-216ENST00000555542 MIGA1Q8NAN2 632 aa29.76■■■□□ 2.35
PRKCH-216ENST00000555542 PARK7Q99497 189 aaKnown RBP29.76■■■□□ 2.35
PRKCH-216ENST00000555542 CPA4Q9UI42 421 aa29.76■■■□□ 2.35
PRKCH-216ENST00000555542 ATAD5Q96QE3 1844 aa29.75■■■□□ 2.35
PRKCH-216ENST00000555542 A0A0G2JLL6 359 aaPredicted RBP29.75■■■□□ 2.35
PRKCH-216ENST00000555542 ECM2O94769 699 aaPredicted RBP29.75■■■□□ 2.35
PRKCH-216ENST00000555542 MOGSQ13724 837 aa29.75■■■□□ 2.35
PRKCH-216ENST00000555542 TTF1Q15361 905 aaPredicted RBP29.75■■■□□ 2.35
PRKCH-216ENST00000555542 PRRT2Q7Z6L0 340 aaPredicted RBP29.75■■■□□ 2.35
PRKCH-216ENST00000555542 CRACR2BQ8N4Y2 399 aaPredicted RBP29.75■■■□□ 2.35
PRKCH-216ENST00000555542 CCDC84Q86UT8 332 aaPredicted RBP29.74■■■□□ 2.35
PRKCH-216ENST00000555542 CERS3Q8IU89 383 aa29.74■■■□□ 2.35
PRKCH-216ENST00000555542 DNAJC2Q99543 621 aaKnown RBP29.74■■■□□ 2.35
PRKCH-216ENST00000555542 SAP30BPQ9UHR5 308 aaKnown RBP29.74■■■□□ 2.35
PRKCH-216ENST00000555542 PHIPQ8WWQ0 1821 aa29.73■■■□□ 2.35
PRKCH-216ENST00000555542 USP5P45974 858 aa29.73■■■□□ 2.35
PRKCH-216ENST00000555542 LACTBP83111 547 aaPredicted RBP29.73■■■□□ 2.35
PRKCH-216ENST00000555542 CAP1Q01518 475 aa29.73■■■□□ 2.35
PRKCH-216ENST00000555542 PALD1Q9ULE6 856 aa29.73■■■□□ 2.35
PRKCH-216ENST00000555542 HLA-DOAP06340 250 aa29.72■■■□□ 2.35
PRKCH-216ENST00000555542 CAP2P40123 477 aa29.72■■■□□ 2.35
PRKCH-216ENST00000555542 GPAT2Q6NUI2 795 aa29.72■■■□□ 2.35
PRKCH-216ENST00000555542 PTPRFP10586 1907 aa29.72■■■□□ 2.35
PRKCH-216ENST00000555542 SLC4A8Q2Y0W8 1093 aa29.71■■■□□ 2.35
PRKCH-216ENST00000555542 TMED8Q6PL24 325 aaPredicted RBP29.71■■■□□ 2.35
PRKCH-216ENST00000555542 C17orf99Q6UX52 265 aa29.71■■■□□ 2.35
PRKCH-216ENST00000555542 ARHGAP39Q9C0H5 1083 aa29.71■■■□□ 2.35
PRKCH-216ENST00000555542 ZSWIM8A7E2V4 1837 aa29.71■■■□□ 2.35
PRKCH-216ENST00000555542 GOLIM4O00461 696 aa29.7■■■□□ 2.35
PRKCH-216ENST00000555542 CYP2C8P10632 490 aa29.7■■■□□ 2.35
PRKCH-216ENST00000555542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.7■■■□□ 2.35
PRKCH-216ENST00000555542 SIPA1L1O43166 1804 aa29.7■■■□□ 2.34
PRKCH-216ENST00000555542 FOXP4Q8IVH2 680 aaPredicted RBP29.69■■■□□ 2.34
PRKCH-216ENST00000555542 TBC1D2Q9BYX2 928 aa29.69■■■□□ 2.34
PRKCH-216ENST00000555542 PTCH2Q9Y6C5 1203 aa29.69■■■□□ 2.34
PRKCH-216ENST00000555542 MYH1P12882 1939 aa29.69■■■□□ 2.34
PRKCH-216ENST00000555542 SPP2Q13103 211 aa29.68■■■□□ 2.34
PRKCH-216ENST00000555542 SLC9C2Q5TAH2 1124 aa29.68■■■□□ 2.34
PRKCH-216ENST00000555542 ZNF280CQ8ND82 737 aa29.68■■■□□ 2.34
PRKCH-216ENST00000555542 LRRCC1Q9C099 1032 aa29.68■■■□□ 2.34
PRKCH-216ENST00000555542 AS3MTQ9HBK9 375 aa29.68■■■□□ 2.34
PRKCH-216ENST00000555542 USP17L5A8MUK1 530 aa29.67■■■□□ 2.34
PRKCH-216ENST00000555542 GNRH1P01148 92 aa29.67■■■□□ 2.34
PRKCH-216ENST00000555542 RRP1BQ14684 758 aaKnown RBP29.67■■■□□ 2.34
PRKCH-216ENST00000555542 SLC9C1Q4G0N8 1177 aa29.67■■■□□ 2.34
PRKCH-216ENST00000555542 SMCR8Q8TEV9 937 aaPredicted RBP29.67■■■□□ 2.34
PRKCH-216ENST00000555542 SLC45A1Q9Y2W3 748 aa29.67■■■□□ 2.34
PRKCH-216ENST00000555542 ADGRA2Q96PE1 1338 aa29.67■■■□□ 2.34
PRKCH-216ENST00000555542 MAGEB6P1A0A0J9YX57 407 aa29.66■■■□□ 2.34
PRKCH-216ENST00000555542 FMNL1O95466 1100 aaPredicted RBP29.66■■■□□ 2.34
PRKCH-216ENST00000555542 PSMC4P43686 418 aa29.66■■■□□ 2.34
PRKCH-216ENST00000555542 BOLA2Q9H3K6 86 aa29.66■■■□□ 2.34
PRKCH-216ENST00000555542 AGTPBP1Q9UPW5 1226 aa29.66■■■□□ 2.34
PRKCH-216ENST00000555542 ASNSP08243 561 aa29.65■■■□□ 2.34
PRKCH-216ENST00000555542 PDE6AP16499 860 aa29.65■■■□□ 2.34
PRKCH-216ENST00000555542 NBPF11Q86T75 865 aa29.65■■■□□ 2.34
PRKCH-216ENST00000555542 HOXD10P28358 340 aa29.64■■■□□ 2.34
PRKCH-216ENST00000555542 ARMC5Q96C12 935 aa29.64■■■□□ 2.34
PRKCH-216ENST00000555542 DNAJC18Q9H819 358 aa29.64■■■□□ 2.34
PRKCH-216ENST00000555542 PAG1Q9NWQ8 432 aa29.64■■■□□ 2.34
PRKCH-216ENST00000555542 PNMA3Q9UL41 463 aa29.64■■■□□ 2.34
PRKCH-216ENST00000555542 GDF11O95390 407 aa29.63■■■□□ 2.33
PRKCH-216ENST00000555542 HMGCS2P54868 508 aa29.63■■■□□ 2.33
PRKCH-216ENST00000555542 PROCA1Q8NCQ7 364 aaPredicted RBP29.63■■■□□ 2.33
PRKCH-216ENST00000555542 EDC3Q96F86 508 aaKnown RBP29.63■■■□□ 2.33
PRKCH-216ENST00000555542 ZNF532Q9HCE3 1301 aa29.63■■■□□ 2.33
PRKCH-216ENST00000555542 SMARCA5O60264 1052 aaPredicted RBP29.62■■■□□ 2.33
PRKCH-216ENST00000555542 ATP5JP18859 108 aa29.62■■■□□ 2.33
PRKCH-216ENST00000555542 PRMT2P55345 433 aa29.62■■■□□ 2.33
PRKCH-216ENST00000555542 TREML2Q5T2D2 321 aa29.62■■■□□ 2.33
PRKCH-216ENST00000555542 METTL16Q86W50 562 aaKnown RBP29.62■■■□□ 2.33
PRKCH-216ENST00000555542 YTHDC1Q96MU7 727 aaKnown RBP29.62■■■□□ 2.33
PRKCH-216ENST00000555542 CRNKL1Q9BZJ0 848 aaKnown RBP29.62■■■□□ 2.33
PRKCH-216ENST00000555542 BCRP11274 1271 aa29.61■■■□□ 2.33
PRKCH-216ENST00000555542 FCGRTP55899 365 aa29.61■■■□□ 2.33
PRKCH-216ENST00000555542 PABPC4Q13310 644 aaKnown RBP eCLIP29.61■■■□□ 2.332e-7■■■■■ 64.2
PRKCH-216ENST00000555542 TTC6Q86TZ1 520 aa29.61■■■□□ 2.33
PRKCH-216ENST00000555542 TRIM47Q96LD4 638 aa29.61■■■□□ 2.33
PRKCH-216ENST00000555542 RIOK1Q9BRS2 568 aaKnown RBP29.61■■■□□ 2.33
PRKCH-216ENST00000555542 LOC285556D6RIA3 1793 aa29.61■■■□□ 2.33
PRKCH-216ENST00000555542 NAV1Q8NEY1 1877 aa29.61■■■□□ 2.33
PRKCH-216ENST00000555542 TMEM106CQ9BVX2 250 aa29.6■■■□□ 2.33
PRKCH-216ENST00000555542 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.6■■■□□ 2.33
PRKCH-216ENST00000555542 TMOD4Q9NZQ9 345 aa29.6■■■□□ 2.33
PRKCH-216ENST00000555542 SERPINB13Q9UIV8 391 aa29.6■■■□□ 2.33
PRKCH-216ENST00000555542 POLR3DP05423 398 aaPredicted RBP29.59■■■□□ 2.33
PRKCH-216ENST00000555542 OSBPP22059 807 aa29.59■■■□□ 2.33
PRKCH-216ENST00000555542 CTGFP29279 349 aa29.59■■■□□ 2.33
PRKCH-216ENST00000555542 MTMR2Q13614 643 aa29.59■■■□□ 2.33
PRKCH-216ENST00000555542 RAET1EQ8TD07 263 aa29.59■■■□□ 2.33
PRKCH-216ENST00000555542 ZNF333Q96JL9 665 aa29.59■■■□□ 2.33
PRKCH-216ENST00000555542 HAUS7Q99871 368 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms