RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
PPP4R3A-209ENST00000555470 GPN3Q9UHW5 284 aaPredicted RBP6.28□□□□□ -1.4
PPP4R3A-209ENST00000555470 MARCH6O60337 910 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 GSTP1P09211 210 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 LCNL1Q6ZST4 164 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 SIAH1Q8IUQ4 282 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 SMYD4Q8IYR2 804 aaPredicted RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 NETO1Q8TDF5 533 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 EPS8L3Q8TE67 593 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 ALKBH8Q96BT7 664 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 FANCD2OSQ96PS1 177 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 RBCK1Q9BYM8 510 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 TANGO6Q9C0B7 1094 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZC3H12CQ9C0D7 883 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 PCOLCE2Q9UKZ9 415 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 JAG2Q9Y219 1238 aa6.27□□□□□ -1.41
PPP4R3A-209ENST00000555470 DYNC1LI2O43237 492 aaPredicted RBP6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 RNGTTO60942 597 aaKnown RBP6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 FAM87AP0C7U9 286 aa6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 TAGLNQ01995 201 aaKnown RBP6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 GRM2Q14416 872 aa6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 KIF4BQ2VIQ3 1234 aa6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZSCAN29Q8IWY8 852 aaPredicted RBP6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 WDR89Q96FK6 387 aaPredicted RBP6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 ASB16Q96NS5 453 aa6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 EMILIN2Q9BXX0 1053 aa6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 MKNK2Q9HBH9 465 aa6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 SSU72Q9NP77 194 aaKnown RBP6.26□□□□□ -1.41
PPP4R3A-209ENST00000555470 MAPK1P28482 360 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 FCGRTP55899 365 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZNF574Q6ZN55 896 aaPredicted RBP6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZNF662Q6ZS27 426 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZSCAN18Q8TBC5 510 aaPredicted RBP6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 KCNB2Q92953 911 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 BACH2Q9BYV9 841 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
PPP4R3A-209ENST00000555470 ZNF862O60290 1169 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 HDLBPQ00341 1268 aaKnown RBP6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 PRKCQQ04759 706 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 CDK5R2Q13319 367 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 DSC3Q14574 896 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 TTLL4Q14679 1199 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 EAPPQ56P03 285 aaPredicted RBP6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 PI16Q6UXB8 463 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 MICAL1Q8TDZ2 1067 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 UBE2Q2Q8WVN8 375 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 LNPKQ9C0E8 428 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 DISC1Q9NRI5 854 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 PCDHGC5Q9Y5F6 944 aa6.24□□□□□ -1.41
PPP4R3A-209ENST00000555470 TLDC2A0PJX2 215 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 RAP1GAPP47736 663 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 IFI16Q16666 785 aaKnown RBP6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 TMC7Q7Z402 723 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 PDZD3Q86UT5 571 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 SULF2Q8IWU5 870 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 DNAJC2Q99543 621 aaKnown RBP6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 DCTN4Q9UJW0 460 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 SAMM50Q9Y512 469 aa6.23□□□□□ -1.41
PPP4R3A-209ENST00000555470 TMEM265A0A087WTH1 108 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 PLEKHD1A6NEE1 506 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 MRPL58Q14197 206 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 LRRC56Q8IYG6 542 aaPredicted RBP6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 PLD6Q8N2A8 252 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 PI4K2BQ8TCG2 481 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 STK35Q8TDR2 534 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 HRASLS5Q96KN8 279 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 RC3H2Q9HBD1 1191 aaKnown RBP6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 LMCD1Q9NZU5 365 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 AKAP2Q9Y2D5 859 aa6.22□□□□□ -1.41
PPP4R3A-209ENST00000555470 TSPAN15O95858 294 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 ATP2B1P20020 1258 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 FUT4P22083 530 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 NME2P22392 152 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 ARNTP27540 789 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 ITGAEP38570 1179 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 ERVK-24P63145 666 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 BNIP3Q12983 259 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 SLC43A3Q8NBI5 491 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 RNF214Q8ND24 703 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 ACSBG1Q96GR2 724 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 BCO2Q9BYV7 579 aa6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 METTL14Q9HCE5 456 aaKnown RBP6.21□□□□□ -1.42
PPP4R3A-209ENST00000555470 RAB11FIP3O75154 756 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 CEACAM5P06731 702 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 ZSCAN22P10073 491 aaPredicted RBP6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 CD8BP10966 210 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 PLCB3Q01970 1234 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 RAD51AP2Q09MP3 1159 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 AOC3Q16853 763 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 C9orf131Q5VYM1 1079 aa6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 MAP1SQ66K74 1059 aaPredicted RBP6.2□□□□□ -1.42
PPP4R3A-209ENST00000555470 SDE2Q6IQ49 451 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms