RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NKPD1Q17RQ9 610 aa9.15□□□□□ -0.94
VRK1-205ENST00000555402 MPZL3Q6UWV2 235 aa9.15□□□□□ -0.94
VRK1-205ENST00000555402 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.94
VRK1-205ENST00000555402 KRT1P04264 644 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 PDE3BQ13370 1112 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 GRM2Q14416 872 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 KIRREL1Q96J84 757 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 FAM129BQ96TA1 746 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 PRDM10Q9NQV6 1147 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 EGFL7Q9UHF1 273 aa9.14□□□□□ -0.95
VRK1-205ENST00000555402 GPN3Q9UHW5 284 aaPredicted RBP9.14□□□□□ -0.95
VRK1-205ENST00000555402 B8ZZF3 427 aa9.13□□□□□ -0.95
VRK1-205ENST00000555402 TMEM67Q5HYA8 995 aa9.13□□□□□ -0.95
VRK1-205ENST00000555402 DTHD1Q6ZMT9 781 aa9.13□□□□□ -0.95
VRK1-205ENST00000555402 CYFIP1Q7L576 1253 aa9.13□□□□□ -0.95
VRK1-205ENST00000555402 DNAJC25Q9H1X3 360 aa9.13□□□□□ -0.95
VRK1-205ENST00000555402 PITPNM2Q9BZ72 1349 aa9.12□□□□□ -0.95
VRK1-205ENST00000555402 EIF1AYO14602 144 aaKnown RBP9.12□□□□□ -0.95
VRK1-205ENST00000555402 TTLL10Q6ZVT0 673 aa9.12□□□□□ -0.95
VRK1-205ENST00000555402 STK35Q8TDR2 534 aa9.12□□□□□ -0.95
VRK1-205ENST00000555402 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
VRK1-205ENST00000555402 NFIBO00712 420 aa9.11□□□□□ -0.95
VRK1-205ENST00000555402 NDUFB5O43674 189 aa9.11□□□□□ -0.95
VRK1-205ENST00000555402 ARNTP27540 789 aa9.11□□□□□ -0.95
VRK1-205ENST00000555402 CLCN7P51798 805 aa9.11□□□□□ -0.95
VRK1-205ENST00000555402 SULF2Q8IWU5 870 aa9.11□□□□□ -0.95
VRK1-205ENST00000555402 SOWAHDA6NJG2 315 aa9.1□□□□□ -0.95
VRK1-205ENST00000555402 FCGRTP55899 365 aa9.1□□□□□ -0.95
VRK1-205ENST00000555402 MAP1SQ66K74 1059 aaPredicted RBP9.1□□□□□ -0.95
VRK1-205ENST00000555402 AMIGO3Q86WK7 504 aa9.1□□□□□ -0.95
VRK1-205ENST00000555402 FBXO15Q8NCQ5 510 aaPredicted RBP9.1□□□□□ -0.95
VRK1-205ENST00000555402 RAPGEFL1Q9UHV5 662 aa9.1□□□□□ -0.95
VRK1-205ENST00000555402 GNAT3A8MTJ3 354 aa9.09□□□□□ -0.95
VRK1-205ENST00000555402 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
VRK1-205ENST00000555402 GPBAR1Q8TDU6 330 aa9.09□□□□□ -0.95
VRK1-205ENST00000555402 EPS8L3Q8TE67 593 aaKnown RBP9.09□□□□□ -0.95
VRK1-205ENST00000555402 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
VRK1-205ENST00000555402 CARS2Q9HA77 564 aaKnown RBP9.09□□□□□ -0.95
VRK1-205ENST00000555402 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
VRK1-205ENST00000555402 H3BRB1 525 aa9.08□□□□□ -0.96
VRK1-205ENST00000555402 EOMESO95936 686 aa9.08□□□□□ -0.96
VRK1-205ENST00000555402 PPM1JQ5JR12 505 aa9.08□□□□□ -0.96
VRK1-205ENST00000555402 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
VRK1-205ENST00000555402 NIF3L1Q9GZT8 377 aa9.08□□□□□ -0.96
VRK1-205ENST00000555402 TUT1Q9H6E5 874 aaKnown RBP9.08□□□□□ -0.96
VRK1-205ENST00000555402 PPP4R2Q9NY27 417 aa9.08□□□□□ -0.96
VRK1-205ENST00000555402 NTF4P34130 210 aa9.07□□□□□ -0.96
VRK1-205ENST00000555402 GDNFP39905 211 aa9.07□□□□□ -0.96
VRK1-205ENST00000555402 BUD31P41223 144 aaPredicted RBP9.07□□□□□ -0.96
VRK1-205ENST00000555402 DIRC2Q96SL1 478 aa9.07□□□□□ -0.96
VRK1-205ENST00000555402 EMILIN2Q9BXX0 1053 aa9.07□□□□□ -0.96
VRK1-205ENST00000555402 NSUN3Q9H649 340 aaKnown RBP9.07□□□□□ -0.96
VRK1-205ENST00000555402 IGHA2P01877 340 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 NME2P22392 152 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 ZNF252P-AS1Q0IIN9 211 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 UBE3DQ7Z6J8 389 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 KRTAP9-3Q9BYQ3 159 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 SEMA3GQ9NS98 782 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 CACNA2D2Q9NY47 1150 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 CSADQ9Y600 493 aa9.06□□□□□ -0.96
VRK1-205ENST00000555402 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 GPR182O15218 404 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 TMEM253P0C7T8 217 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 ACSBG1Q96GR2 724 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 HSPA12BQ96MM6 686 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 ATP13A1Q9HD20 1204 aa9.05□□□□□ -0.96
VRK1-205ENST00000555402 PRDM5Q9NQX1 630 aaPredicted RBP9.05□□□□□ -0.96
VRK1-205ENST00000555402 XRCC5P13010 732 aaKnown RBP9.04□□□□□ -0.96
VRK1-205ENST00000555402 RBM25P49756 843 aaKnown RBP9.04□□□□□ -0.96
VRK1-205ENST00000555402 RING1Q06587 406 aa9.04□□□□□ -0.96
VRK1-205ENST00000555402 MPRIPQ6WCQ1 1025 aa9.04□□□□□ -0.96
VRK1-205ENST00000555402 NPAS4Q8IUM7 802 aa9.04□□□□□ -0.96
VRK1-205ENST00000555402 MAPK8IP1Q9UQF2 711 aa9.04□□□□□ -0.96
VRK1-205ENST00000555402 C12orf40Q86WS4 652 aa9.03□□□□□ -0.96
VRK1-205ENST00000555402 TMC1Q8TDI8 760 aa9.03□□□□□ -0.96
VRK1-205ENST00000555402 KCNK12Q9HB15 430 aa9.03□□□□□ -0.96
VRK1-205ENST00000555402 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
VRK1-205ENST00000555402 PICK1Q9NRD5 415 aa9.03□□□□□ -0.96
VRK1-205ENST00000555402 DCDC2CA8MYV0 355 aa9.02□□□□□ -0.97
VRK1-205ENST00000555402 CDC37L1Q7L3B6 337 aa9.02□□□□□ -0.97
VRK1-205ENST00000555402 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
VRK1-205ENST00000555402 AKAP2Q9Y2D5 859 aa9.02□□□□□ -0.97
VRK1-205ENST00000555402 FANCGO15287 622 aa9.01□□□□□ -0.97
VRK1-205ENST00000555402 INHBBP09529 407 aa9.01□□□□□ -0.97
VRK1-205ENST00000555402 KCNA10Q16322 511 aa9.01□□□□□ -0.97
VRK1-205ENST00000555402 BCO2Q9BYV7 579 aa9.01□□□□□ -0.97
VRK1-205ENST00000555402 NLRP2Q9NX02 1062 aa9.01□□□□□ -0.97
VRK1-205ENST00000555402 PRR33A8MZF0 331 aa9□□□□□ -0.97
VRK1-205ENST00000555402 FAM155AB1AL88 458 aaPredicted RBP9□□□□□ -0.97
VRK1-205ENST00000555402 ZBTB37Q5TC79 503 aa9□□□□□ -0.97
VRK1-205ENST00000555402 CDKAL1Q5VV42 579 aa9□□□□□ -0.97
VRK1-205ENST00000555402 PI16Q6UXB8 463 aa9□□□□□ -0.97
VRK1-205ENST00000555402 ATG14Q6ZNE5 492 aa9□□□□□ -0.97
VRK1-205ENST00000555402 ZNF428Q96B54 188 aa9□□□□□ -0.97
VRK1-205ENST00000555402 DCP1AQ9NPI6 582 aaPredicted RBP9□□□□□ -0.97
VRK1-205ENST00000555402 CIAPIN1Q6FI81 312 aa8.99□□□□□ -0.97
VRK1-205ENST00000555402 ARMCX6Q7L4S7 300 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms