RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 ELP3Q9H9T3 547 aa14.42□□□□□ -0.1
ACTN1-214ENST00000555075 WBP1LQ9NX94 342 aa14.42□□□□□ -0.1
ACTN1-214ENST00000555075 AK9Q5TCS8 1911 aa14.42□□□□□ -0.1
ACTN1-214ENST00000555075 PAPPA2Q9BXP8 1791 aa14.42□□□□□ -0.1
ACTN1-214ENST00000555075 MINDY4BA8MYZ0 360 aa14.41□□□□□ -0.1
ACTN1-214ENST00000555075 CAPN15O75808 1086 aa14.41□□□□□ -0.1
ACTN1-214ENST00000555075 CTCFP49711 727 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-214ENST00000555075 MAP2K1Q02750 393 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-214ENST00000555075 MKRN3Q13064 507 aaKnown RBP14.41□□□□□ -0.1
ACTN1-214ENST00000555075 SH3BP5LQ7L8J4 393 aa14.41□□□□□ -0.1
ACTN1-214ENST00000555075 SEC62Q99442 399 aaKnown RBP14.41□□□□□ -0.1
ACTN1-214ENST00000555075 DCP1AQ9NPI6 582 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-214ENST00000555075 ARPP21Q9UBL0 812 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-214ENST00000555075 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
ACTN1-214ENST00000555075 ATRNL1Q5VV63 1379 aa14.41□□□□□ -0.1
ACTN1-214ENST00000555075 COL2A1P02458 1487 aaPredicted RBP14.4□□□□□ -0.1
ACTN1-214ENST00000555075 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
ACTN1-214ENST00000555075 AOC2O75106 756 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 GSPT1P15170 499 aaKnown RBP14.4□□□□□ -0.1
ACTN1-214ENST00000555075 NOGQ13253 232 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 MAP3K11Q16584 847 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 GIMAP6Q6P9H5 292 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 CCDC129Q6ZRS4 1044 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 ZNF287Q9HBT7 754 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 CABP5Q9NP86 173 aa14.4□□□□□ -0.1
ACTN1-214ENST00000555075 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
ACTN1-214ENST00000555075 FAM196BA6NMK8 535 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 USP17L12C9JPN9 530 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 USP17L21D6R901 530 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 TBC1D12O60347 775 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 VGLL4Q14135 290 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 KIAA1211Q6ZU35 1233 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.39□□□□□ -0.11
ACTN1-214ENST00000555075 ZKSCAN4Q969J2 545 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-214ENST00000555075 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 CCDC171Q6TFL3 1326 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 SSC5DA1L4H1 1573 aa14.39□□□□□ -0.11
ACTN1-214ENST00000555075 A0A0D9SFI3 127 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
ACTN1-214ENST00000555075 CTNND1O60716 968 aaKnown RBP14.38□□□□□ -0.11
ACTN1-214ENST00000555075 INPP5BP32019 993 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 LBX1P52954 281 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 BMP2KLQ5H9B9 411 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 LDLRAD1Q5T700 205 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 SKAP1Q86WV1 359 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 ERO1BQ86YB8 467 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 RASAL3Q86YV0 1011 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 IFNL3Q8IZI9 196 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 STK11IPQ8N1F8 1099 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 CLMNQ96JQ2 1002 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 EHD4Q9H223 541 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 MKNK2Q9HBH9 465 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 PRDM10Q9NQV6 1147 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 SWAP70Q9UH65 585 aa14.38□□□□□ -0.11
ACTN1-214ENST00000555075 MYH7P12883 1935 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 SLC10A3P09131 477 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
ACTN1-214ENST00000555075 SREBF2Q12772 1141 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 CERKLQ49MI3 558 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-214ENST00000555075 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-214ENST00000555075 SCYL3Q8IZE3 742 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 OPTNQ96CV9 577 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 AS3MTQ9HBK9 375 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 TOMM22Q9NS69 142 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 RAD50Q92878 1312 aa14.37□□□□□ -0.11
ACTN1-214ENST00000555075 ZBTB48P10074 688 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-214ENST00000555075 CYP2D6P10635 497 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 MAP2K2P36507 400 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 PLCD1P51178 756 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 PDE4BQ07343 736 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 SPRYD7Q5W111 196 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 OTUD7BQ6GQQ9 843 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 CTR9Q6PD62 1173 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
ACTN1-214ENST00000555075 WNK4Q96J92 1243 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 CTNNA3Q9UI47 895 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 ZNF112Q9UJU3 913 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
ACTN1-214ENST00000555075 MANSC4A6NHS7 340 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-214ENST00000555075 CDC45O75419 566 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 GDF11O95390 407 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 ASNSP08243 561 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 CHMLP26374 656 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 CAP2P40123 477 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 KIF23Q02241 960 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-214ENST00000555075 ABCB5Q2M3G0 1257 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 SBK1Q52WX2 424 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 C12orf60Q5U649 245 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-214ENST00000555075 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 ZHX2Q9Y6X8 837 aa14.35□□□□□ -0.11
ACTN1-214ENST00000555075 CYP2D7A0A087X1C5 515 aa14.34□□□□□ -0.11
ACTN1-214ENST00000555075 SPDYE5A6NIY4 337 aa14.34□□□□□ -0.11
ACTN1-214ENST00000555075 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
ACTN1-214ENST00000555075 GTF2A2P52657 109 aa14.34□□□□□ -0.11
ACTN1-214ENST00000555075 PPATQ06203 517 aa14.34□□□□□ -0.11
ACTN1-214ENST00000555075 SNAPC2Q13487 334 aa14.34□□□□□ -0.11
ACTN1-214ENST00000555075 RAB3GAP1Q15042 981 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms