RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 USP5P45974 858 aa14.93□□□□□ -0.02
SYNE2-214ENST00000554928 JAG1P78504 1218 aa14.93□□□□□ -0.02
SYNE2-214ENST00000554928 SHROOM1Q2M3G4 852 aaPredicted RBP14.93□□□□□ -0.02
SYNE2-214ENST00000554928 CCDC84Q86UT8 332 aaPredicted RBP14.93□□□□□ -0.02
SYNE2-214ENST00000554928 OPTNQ96CV9 577 aa14.93□□□□□ -0.02
SYNE2-214ENST00000554928 COL2A1P02458 1487 aaPredicted RBP14.93□□□□□ -0.02
SYNE2-214ENST00000554928 RNF113AO15541 343 aaKnown RBP14.92□□□□□ -0.02
SYNE2-214ENST00000554928 OTUD5Q96G74 571 aa14.92□□□□□ -0.02
SYNE2-214ENST00000554928 FSD1Q9BTV5 496 aa14.92□□□□□ -0.02
SYNE2-214ENST00000554928 CSADQ9Y600 493 aa14.92□□□□□ -0.02
SYNE2-214ENST00000554928 SPDYE5A6NIY4 337 aa14.91□□□□□ -0.02
SYNE2-214ENST00000554928 PLCD1P51178 756 aa14.91□□□□□ -0.02
SYNE2-214ENST00000554928 MAP2K1Q02750 393 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-214ENST00000554928 TMED8Q6PL24 325 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-214ENST00000554928 HOOK2Q96ED9 719 aa14.91□□□□□ -0.02
SYNE2-214ENST00000554928 CRNKL1Q9BZJ0 848 aaKnown RBP14.91□□□□□ -0.02
SYNE2-214ENST00000554928 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.91□□□□□ -0.02
SYNE2-214ENST00000554928 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
SYNE2-214ENST00000554928 FOCADQ5VW36 1801 aa14.91□□□□□ -0.02
SYNE2-214ENST00000554928 AK9Q5TCS8 1911 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 DDX60LQ5H9U9 1706 aaKnown RBP14.9□□□□□ -0.02
SYNE2-214ENST00000554928 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 UNCXA6NJT0 531 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 TBC1D12O60347 775 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 HSPA8P11142 646 aaKnown RBP14.9□□□□□ -0.02
SYNE2-214ENST00000554928 NOL9Q5SY16 702 aaKnown RBP14.9□□□□□ -0.02
SYNE2-214ENST00000554928 ZSCAN25Q6NSZ9 544 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 APPBP2Q92624 585 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 MS4A4AQ96JQ5 239 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
SYNE2-214ENST00000554928 OSBPL3Q9H4L5 887 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 RNF186Q9NXI6 227 aa14.9□□□□□ -0.02
SYNE2-214ENST00000554928 IGF2BP3O00425 579 aaKnown RBP eCLIP14.89□□□□□ -0.03
SYNE2-214ENST00000554928 IRF6O14896 467 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 ZBTB48P10074 688 aaPredicted RBP14.89□□□□□ -0.03
SYNE2-214ENST00000554928 ZMYM1Q5SVZ6 1142 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 METTL16Q86W50 562 aaKnown RBP14.89□□□□□ -0.03
SYNE2-214ENST00000554928 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 BRI3BPQ8WY22 251 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 AIDAQ96BJ3 306 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 PTPN18Q99952 460 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
SYNE2-214ENST00000554928 R3HDMLQ9H3Y0 253 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 SLC4A4Q9Y6R1 1079 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 MYH7P12883 1935 aa14.89□□□□□ -0.03
SYNE2-214ENST00000554928 GPAA1O43292 621 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 TRPA1O75762 1119 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 GSPT1P15170 499 aaKnown RBP14.88□□□□□ -0.03
SYNE2-214ENST00000554928 TM4SF4P48230 202 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 LBX1P52954 281 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 ERO1BQ86YB8 467 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 CERS3Q8IU89 383 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 DYNLL2Q96FJ2 89 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 EPB41L4AQ9HCS5 686 aaPredicted RBP14.88□□□□□ -0.03
SYNE2-214ENST00000554928 MCM9Q9NXL9 1143 aa14.88□□□□□ -0.03
SYNE2-214ENST00000554928 NAV1Q8NEY1 1877 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 GSG1L2A8MUP6 293 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 TRIM6-TRIM34B2RNG4 842 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 FOXP2O15409 715 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 GDF11O95390 407 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 ZFYP08048 801 aaPredicted RBP14.87□□□□□ -0.03
SYNE2-214ENST00000554928 PTPRAP18433 802 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 PPIL2Q13356 520 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 RILPL2Q969X0 211 aa14.87□□□□□ -0.03
SYNE2-214ENST00000554928 HERC5Q9UII4 1024 aaKnown RBP14.87□□□□□ -0.03
SYNE2-214ENST00000554928 A0A0D9SFI3 127 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 TESPA1A2RU30 521 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-214ENST00000554928 MANSC4A6NHS7 340 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-214ENST00000554928 CTNND1O60716 968 aaKnown RBP14.86□□□□□ -0.03
SYNE2-214ENST00000554928 POLR3DP05423 398 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-214ENST00000554928 HLA-DOAP06340 250 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 SHMT1P34896 483 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 CAP2P40123 477 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 PPATQ06203 517 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 GABPAQ06546 454 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 MOGSQ13724 837 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 IFNL1Q8IU54 200 aa14.86□□□□□ -0.03
SYNE2-214ENST00000554928 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-214ENST00000554928 CRACR2BQ8N4Y2 399 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-214ENST00000554928 CCL15-CCL14A0A0B4J2E2 113 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 USP17L12C9JPN9 530 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 USP17L21D6R901 530 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 TBC1D8O95759 1140 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 CTCFP49711 727 aaPredicted RBP14.85□□□□□ -0.03
SYNE2-214ENST00000554928 NMIQ13287 307 aaPredicted RBP14.85□□□□□ -0.03
SYNE2-214ENST00000554928 DGKZQ13574 1117 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 CCL15Q16663 113 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 VPS53Q5VIR6 699 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 CTR9Q6PD62 1173 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 FAM43AQ8N2R8 423 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 EHD4Q9H223 541 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 ATP8A2Q9NTI2 1148 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 SERPINB13Q9UIV8 391 aa14.85□□□□□ -0.03
SYNE2-214ENST00000554928 KCNH4Q9UQ05 1017 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 830.6 ms