RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, human

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC3-208	ENST00000554811	CSRNP2	Q9H175	543 aa		13.55	□□□□□ -0.24
XRCC3-208	ENST00000554811	ZCCHC17	Q9NP64	241 aa	Known RBP	13.55	□□□□□ -0.24
XRCC3-208	ENST00000554811	WDR17	Q8IZU2	1322 aa		13.55	□□□□□ -0.24
XRCC3-208	ENST00000554811	TPM1	P09493	284 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	TOGARAM2	Q6ZUX3	1019 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	STRBP	Q96SI9	672 aa	Known RBP	13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	NUP88	Q99567	741 aa	Predicted RBP	13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	NLRP5	P59047	1200 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	FMR1	Q06787	632 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	IFIT1B	Q5T764	474 aa	Known RBP	13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	TFCP2L1	Q9NZI6	479 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	EXOC5	O00471	708 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	ZBTB22	O15209	634 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	UQCRFS1P1	P0C7P4	283 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	CLCN6	P51797	869 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	ZNF654	Q8IZM8	581 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	WASF1	Q92558	559 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	ISCA1	Q9BUE6	129 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	PPP2R2C	Q9Y2T4	447 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	MAP3K15	Q6ZN16	1313 aa		13.54	□□□□□ -0.24
XRCC3-208	ENST00000554811	TRIM75P	A6NK02	468 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	N4BP3	O15049	544 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	PDE8A	O60658	829 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	RRAGB	Q5VZM2	374 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	GTPBP4	Q9BZE4	634 aa	Known RBP	13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	NBPF3	Q9H094	633 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	LY9	Q9HBG7	655 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	MAN1B1	Q9UKM7	699 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	CTNND2	Q9UQB3	1225 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	LRRC37A3	O60309	1634 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	SALL1	Q9NSC2	1324 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	SOWAHD	A6NJG2	315 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	CUTA	O60888	179 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	DNA2	P51530	1060 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	FILIP1L	Q4L180	1135 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	LPIN2	Q92539	896 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	BRMS1	Q9HCU9	246 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	ATG3	Q9NT62	314 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	IMPACT	Q9P2X3	320 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	DDX41	Q9UJV9	622 aa	Known RBP	13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	RIPOR2	Q9Y4F9	1068 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	TNKS	O95271	1327 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	PATL2	C9JE40	543 aa	Known RBP	13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	NMT2	O60551	498 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	FAM193A	P78312	1265 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	RBM6	P78332	1123 aa	Known RBP	13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	ZNF569	Q5MCW4	686 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	PIK3AP1	Q6ZUJ8	805 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	NYAP1	Q6ZVC0	841 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	BRINP3	Q76B58	766 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	TMEM87B	Q96K49	555 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	GDAP1L1	Q96MZ0	367 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	WDR24	Q96S15	920 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	VAT1L	Q9HCJ6	419 aa		13.53	□□□□□ -0.24
XRCC3-208	ENST00000554811	SPATA31A3	Q5VYP0	1347 aa		13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	TEX33	O43247	280 aa		13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	TFRC	P02786	760 aa	Known RBP	13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	BMS1	Q14692	1282 aa	Known RBP	13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	NCAPH	Q15003	741 aa		13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	NOM1	Q5C9Z4	860 aa	Known RBP	13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	IGSF22	Q8N9C0	903 aa		13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	RASGRP4	Q8TDF6	673 aa		13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	KRT23	Q9C075	422 aa		13.52	□□□□□ -0.24
XRCC3-208	ENST00000554811	FKBP15	Q5T1M5	1219 aa		13.52	□□□□□ -0.25
XRCC3-208	ENST00000554811	CATIP	Q7Z7H3	387 aa		13.52	□□□□□ -0.25
XRCC3-208	ENST00000554811	NEK11	Q8NG66	645 aa		13.52	□□□□□ -0.25
XRCC3-208	ENST00000554811	FER1L4	A9Z1Z3	1794 aa		13.52	□□□□□ -0.25
XRCC3-208	ENST00000554811	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
XRCC3-208	ENST00000554811	TAB2	Q9NYJ8	693 aa		13.52	□□□□□ -0.25
XRCC3-208	ENST00000554811	MAGEB6P1	A0A0J9YX57	407 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	CCP110	O43303	1012 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	PLEKHA8P1	O95397	391 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	PPP2R3A	Q06190	1150 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	IQCA1	Q86XH1	822 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	FANCB	Q8NB91	859 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	DACH1	Q9UI36	760 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	CCDC196	A0A1B0GTZ2	297 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	FAM170A	A1A519	330 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	TSPY2	A6NKD2	308 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	SUSD4	Q5VX71	490 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	AGXT2	Q9BYV1	514 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	PPARD	Q03181	441 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	CTCFL	Q8NI51	663 aa	Predicted RBP	13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	ESR2	Q92731	530 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	SLAIN2	Q9P270	581 aa		13.51	□□□□□ -0.25
XRCC3-208	ENST00000554811	TNNT3	P45378	269 aa	Predicted RBP	13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	SPECC1L	Q69YQ0	1117 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	IGDCC4	Q8TDY8	1250 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	CCDC102A	Q96A19	550 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	DRC1	Q96MC2	740 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	STX8	Q9UNK0	236 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811		A0A0U1RQJ8	604 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	PPARA	Q07869	468 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	ATRIP	Q8WXE1	791 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	SYMPK	Q92797	1274 aa	Known RBP	13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	CAPZA3	Q96KX2	299 aa		13.5	□□□□□ -0.25
XRCC3-208	ENST00000554811	USP17L12	C9JPN9	530 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms