RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 MCM9Q9NXL9 1143 aa14.49□□□□□ -0.09
RIPK3-204ENST00000554756 A0A0D9SFI3 127 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 REC8O95072 547 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 POLR3DP05423 398 aaPredicted RBP14.48□□□□□ -0.09
RIPK3-204ENST00000554756 HLA-DOAP06340 250 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 CYP2D6P10635 497 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.48□□□□□ -0.09
RIPK3-204ENST00000554756 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.48□□□□□ -0.09
RIPK3-204ENST00000554756 ZKSCAN4Q969J2 545 aaPredicted RBP14.48□□□□□ -0.09
RIPK3-204ENST00000554756 SLC10A4Q96EP9 437 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.48□□□□□ -0.09
RIPK3-204ENST00000554756 DIAPH3Q9NSV4 1193 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 PI4KBQ9UBF8 816 aa14.48□□□□□ -0.09
RIPK3-204ENST00000554756 WDR33Q9C0J8 1336 aaKnown RBP14.48□□□□□ -0.09
RIPK3-204ENST00000554756 AOC2O75106 756 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 APPP05067 770 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 INPP5BP32019 993 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 ECE1P42892 770 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 EVX2Q03828 476 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
RIPK3-204ENST00000554756 VGLL4Q14135 290 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 RASAL3Q86YV0 1011 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 CRACR2BQ8N4Y2 399 aaPredicted RBP14.47□□□□□ -0.09
RIPK3-204ENST00000554756 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 ELP3Q9H9T3 547 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 HELLSQ9NRZ9 838 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 ATP8A2Q9NTI2 1148 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 CHMP5Q9NZZ3 219 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 CIZ1Q9ULV3 898 aaPredicted RBP14.47□□□□□ -0.09
RIPK3-204ENST00000554756 COL2A1P02458 1487 aaPredicted RBP14.47□□□□□ -0.09
RIPK3-204ENST00000554756 GSG1L2A8MUP6 293 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 EPB41L2O43491 1005 aaKnown RBP14.47□□□□□ -0.09
RIPK3-204ENST00000554756 PLCD1P51178 756 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 MCMDC2Q4G0Z9 681 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 ZNF112Q9UJU3 913 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 CSADQ9Y600 493 aa14.47□□□□□ -0.09
RIPK3-204ENST00000554756 CYP2D7A0A087X1C5 515 aa14.46□□□□□ -0.09
RIPK3-204ENST00000554756 FAM155AB1AL88 458 aaPredicted RBP14.46□□□□□ -0.09
RIPK3-204ENST00000554756 SLC10A3P09131 477 aa14.46□□□□□ -0.09
RIPK3-204ENST00000554756 MAP3K10Q02779 954 aa14.46□□□□□ -0.09
RIPK3-204ENST00000554756 RABEP1Q15276 862 aa14.46□□□□□ -0.09
RIPK3-204ENST00000554756 CWC27Q6UX04 472 aaKnown RBP14.46□□□□□ -0.09
RIPK3-204ENST00000554756 TTC6Q86TZ1 520 aa14.46□□□□□ -0.09
RIPK3-204ENST00000554756 FOXP4Q8IVH2 680 aaPredicted RBP14.46□□□□□ -0.09
RIPK3-204ENST00000554756 CCDC102AQ96A19 550 aa14.46□□□□□ -0.09
RIPK3-204ENST00000554756 MYH7P12883 1935 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 PHF20L1A8MW92 1017 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 USP17L12C9JPN9 530 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 USP17L21D6R901 530 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 TBC1D12O60347 775 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 GNAT2P19087 354 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 TICAM2Q86XR7 235 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 ZIC5Q96T25 663 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 KIF2CQ99661 725 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 SNCAIPQ9Y6H5 919 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 PATL2C9JE40 543 aaKnown RBP14.45□□□□□ -0.1
RIPK3-204ENST00000554756 SMIM22K7EJ46 135 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 HIP1O00291 1037 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 TDO2P48775 406 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 RRP1BQ14684 758 aaKnown RBP14.45□□□□□ -0.1
RIPK3-204ENST00000554756 VPS53Q5VIR6 699 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 CTR9Q6PD62 1173 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 ZNF589Q86UQ0 364 aaPredicted RBP14.45□□□□□ -0.1
RIPK3-204ENST00000554756 DNAJC18Q9H819 358 aa14.45□□□□□ -0.1
RIPK3-204ENST00000554756 EPB41L4AQ9HCS5 686 aaPredicted RBP14.45□□□□□ -0.1
RIPK3-204ENST00000554756 HERC5Q9UII4 1024 aaKnown RBP14.45□□□□□ -0.1
RIPK3-204ENST00000554756 AMOTL1Q8IY63 956 aa14.44□□□□□ -0.1
RIPK3-204ENST00000554756 IFNL3Q8IZI9 196 aa14.44□□□□□ -0.1
RIPK3-204ENST00000554756 JMYQ8N9B5 988 aa14.44□□□□□ -0.1
RIPK3-204ENST00000554756 DYNLL2Q96FJ2 89 aa14.44□□□□□ -0.1
RIPK3-204ENST00000554756 WNK4Q96J92 1243 aa14.44□□□□□ -0.1
RIPK3-204ENST00000554756 SLKQ9H2G2 1235 aaPredicted RBP14.44□□□□□ -0.1
RIPK3-204ENST00000554756 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
RIPK3-204ENST00000554756 UNCXA6NJT0 531 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 MINDY4BA8MYZ0 360 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 CHMLP26374 656 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 GJA5P36382 358 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 KIF23Q02241 960 aaPredicted RBP14.43□□□□□ -0.1
RIPK3-204ENST00000554756 C12orf60Q5U649 245 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 SPRYD7Q5W111 196 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 STK11IPQ8N1F8 1099 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 OPTNQ96CV9 577 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 OTUD5Q96G74 571 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 USP26Q9BXU7 913 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.43□□□□□ -0.1
RIPK3-204ENST00000554756 AK9Q5TCS8 1911 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 CCDC171Q6TFL3 1326 aa14.43□□□□□ -0.1
RIPK3-204ENST00000554756 CDK5RAP2Q96SN8 1893 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 NOGQ13253 232 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 NOL9Q5SY16 702 aaKnown RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 GIMAP6Q6P9H5 292 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 METTL16Q86W50 562 aaKnown RBP14.42□□□□□ -0.1
RIPK3-204ENST00000554756 SCYL3Q8IZE3 742 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 SLC44A5Q8NCS7 719 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 NACAP1Q9BZK3 213 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 NAPBQ9H115 298 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 EHD4Q9H223 541 aa14.42□□□□□ -0.1
RIPK3-204ENST00000554756 FOCADQ5VW36 1801 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms