RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 FER1L6Q2WGJ9 1857 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 CCDC88AQ3V6T2 1871 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 KLRG2A4D1S0 409 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-230ENST00000554673 HMMRO75330 724 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 TAF5LO75529 589 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 SSFA2P28290 1259 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 SOX11P35716 441 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 NNTQ13423 1086 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 GRIK5Q16478 980 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 CRY2Q49AN0 593 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 GPR101Q96P66 508 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-230ENST00000554673 SEC62Q99442 399 aaKnown RBP7.18□□□□□ -1.26
ATXN3-230ENST00000554673 TACC3Q9Y6A5 838 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 AOX1Q06278 1338 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
ATXN3-230ENST00000554673 A0A0D9SFI3 127 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 A0A1B0GUL7 405 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 C6orf229H3BNL8 230 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 SMIM22K7EJ46 135 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 PHKA1P46020 1223 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 PTH1RQ03431 593 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 PARP10Q53GL7 1025 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 HSP90AB3PQ58FF7 597 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 DNAJC14Q6Y2X3 702 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-230ENST00000554673 ILDR2Q71H61 639 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 ZNF589Q86UQ0 364 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-230ENST00000554673 RETREG3Q86VR2 466 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 FAM227BQ96M60 508 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 CHMP4AQ9BY43 222 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 CHMP4BQ9H444 224 aaKnown RBP7.17□□□□□ -1.26
ATXN3-230ENST00000554673 KIAA1522Q9P206 1035 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-230ENST00000554673 C10orf71Q711Q0 1435 aa7.17□□□□□ -1.26
ATXN3-230ENST00000554673 SERPINB2P05120 415 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 CCNYL3P0C7X3 344 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 MCAMP43121 646 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
ATXN3-230ENST00000554673 ELOAQ14241 798 aaKnown RBP7.16□□□□□ -1.26
ATXN3-230ENST00000554673 TRAPPC3LQ5T215 181 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 BAP1Q92560 729 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 XAGE2Q96GT9 111 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 ESYT1Q9BSJ8 1104 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 USP26Q9BXU7 913 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 LSG1Q9H089 658 aaKnown RBP7.16□□□□□ -1.26
ATXN3-230ENST00000554673 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 BOLA2Q9H3K6 86 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 GPR108Q9NPR9 543 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 PIH1D3Q9NQM4 214 aaKnown RBP7.16□□□□□ -1.26
ATXN3-230ENST00000554673 MINPP1Q9UNW1 487 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 CHMP3Q9Y3E7 222 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 MYH2Q9UKX2 1941 aa7.16□□□□□ -1.26
ATXN3-230ENST00000554673 LAMB1P07942 1786 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 ATP5JP18859 108 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 KCNA3P22001 575 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 CTDSPL2Q05D32 466 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 CHRNDQ07001 517 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 NMIQ13287 307 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-230ENST00000554673 SLC15A2Q16348 729 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 CCDC129Q6ZRS4 1044 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 IL17RAQ96F46 866 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 HAUS7Q99871 368 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 ECHDC1Q9NTX5 307 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 ZNF804BA4D1E1 1349 aa7.15□□□□□ -1.26
ATXN3-230ENST00000554673 TIAM2Q8IVF5 1701 aa7.15□□□□□ -1.27
ATXN3-230ENST00000554673 SGSM2O43147 1006 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 MAN1A2O60476 641 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 DTNBO60941 627 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 CDC45O75419 566 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 SBF1O95248 1867 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 PDE8BO95263 885 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 MMP10P09238 476 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 ERCC3P19447 782 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 RFC4P35249 363 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 IL15P40933 162 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-230ENST00000554673 ZAP70P43403 619 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 G3BP1Q13283 466 aaKnown RBP eCLIP7.14□□□□□ -1.27
ATXN3-230ENST00000554673 C6orf118Q5T5N4 469 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 PHLDB3Q6NSJ2 640 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 TTC41PQ6P2S7 1318 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 ADGRA1Q86SQ6 560 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 ARFGEF1Q9Y6D6 1849 aa7.14□□□□□ -1.27
ATXN3-230ENST00000554673 TCRBV5S4A2TA0A5A2 114 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 ANKRD18BA2A2Z9 1011 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 M0R2C6 588 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 ADH1CP00326 375 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 CYP2E1P05181 493 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 FDX1P10109 184 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 TIMP2P16035 220 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 HOXA10P31260 410 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 PRELPP51888 382 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 KCNMA1Q12791 1236 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 IFIT5Q13325 482 aaKnown RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 RASGRF1Q13972 1273 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 ATP2B3Q16720 1220 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 NOM1Q5C9Z4 860 aaKnown RBP7.13□□□□□ -1.27
ATXN3-230ENST00000554673 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
ATXN3-230ENST00000554673 LDHAL6AQ6ZMR3 332 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms