RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 METTL16Q86W50 562 aaKnown RBP13.58□□□□□ -0.24
ABCD4-221ENST00000554453 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 TGFBRAP1Q8WUH2 860 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 TBC1D2Q9BYX2 928 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 PTCH2Q9Y6C5 1203 aa13.58□□□□□ -0.24
ABCD4-221ENST00000554453 COL2A1P02458 1487 aaPredicted RBP13.58□□□□□ -0.24
ABCD4-221ENST00000554453 FAM196BA6NMK8 535 aa13.57□□□□□ -0.24
ABCD4-221ENST00000554453 HMMRO75330 724 aa13.57□□□□□ -0.24
ABCD4-221ENST00000554453 CTGFP29279 349 aa13.57□□□□□ -0.24
ABCD4-221ENST00000554453 PSMC4P43686 418 aa13.57□□□□□ -0.24
ABCD4-221ENST00000554453 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
ABCD4-221ENST00000554453 PARK7Q99497 189 aaKnown RBP13.57□□□□□ -0.24
ABCD4-221ENST00000554453 DOCK2Q92608 1830 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 USP17L5A8MUK1 530 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 RAB11FIP3O75154 756 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
ABCD4-221ENST00000554453 CYP2C8P10632 490 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 MAP3K12Q12852 859 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 SPP2Q13103 211 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 GADL1Q6ZQY3 521 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 CERS3Q8IU89 383 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 MAPKAPK5Q8IW41 473 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 CLASRPQ8N2M8 674 aaKnown RBP13.56□□□□□ -0.24
ABCD4-221ENST00000554453 ZNF280CQ8ND82 737 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 KIF1BPQ96EK5 621 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 ZNF333Q96JL9 665 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 ANTXR1Q9H6X2 564 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 SRRDQ9UH36 339 aa13.56□□□□□ -0.24
ABCD4-221ENST00000554453 TRIM75PA6NK02 468 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 FMNL1O95466 1100 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-221ENST00000554453 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
ABCD4-221ENST00000554453 SLC9C1Q4G0N8 1177 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-221ENST00000554453 PROCA1Q8NCQ7 364 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-221ENST00000554453 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.55□□□□□ -0.24
ABCD4-221ENST00000554453 TRIM47Q96LD4 638 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 GINM1Q9NU53 330 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.55□□□□□ -0.24
ABCD4-221ENST00000554453 PALD1Q9ULE6 856 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 AGTPBP1Q9UPW5 1226 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 PHIPQ8WWQ0 1821 aa13.55□□□□□ -0.24
ABCD4-221ENST00000554453 PTPRFP10586 1907 aa13.54□□□□□ -0.24
ABCD4-221ENST00000554453 OSBPP22059 807 aa13.54□□□□□ -0.24
ABCD4-221ENST00000554453 TTF1Q15361 905 aaPredicted RBP13.54□□□□□ -0.24
ABCD4-221ENST00000554453 SH3D19Q5HYK7 790 aa13.54□□□□□ -0.24
ABCD4-221ENST00000554453 MAGEB6Q8N7X4 407 aa13.54□□□□□ -0.24
ABCD4-221ENST00000554453 WDR18Q9BV38 432 aa13.54□□□□□ -0.24
ABCD4-221ENST00000554453 FLT1P17948 1338 aa13.54□□□□□ -0.24
ABCD4-221ENST00000554453 ASNSP08243 561 aa13.53□□□□□ -0.24
ABCD4-221ENST00000554453 EN2P19622 333 aaPredicted RBP13.53□□□□□ -0.24
ABCD4-221ENST00000554453 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
ABCD4-221ENST00000554453 AS3MTQ9HBK9 375 aa13.53□□□□□ -0.24
ABCD4-221ENST00000554453 DOCK1Q14185 1865 aa13.53□□□□□ -0.24
ABCD4-221ENST00000554453 C19orf81C9J6K1 198 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 APBB1O00213 710 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 ECM2O94769 699 aaPredicted RBP13.52□□□□□ -0.25
ABCD4-221ENST00000554453 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 IFIT2P09913 472 aaKnown RBP13.52□□□□□ -0.25
ABCD4-221ENST00000554453 FCGRTP55899 365 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 JAG1P78504 1218 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
ABCD4-221ENST00000554453 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
ABCD4-221ENST00000554453 CDK5RAP2Q96SN8 1893 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 HOXA7P31268 230 aaPredicted RBP13.51□□□□□ -0.25
ABCD4-221ENST00000554453 GRK4P32298 578 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 USP5P45974 858 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 HMGCS2P54868 508 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 BACE1P56817 501 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
ABCD4-221ENST00000554453 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 RAET1EQ8TD07 263 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
ABCD4-221ENST00000554453 SH3TC2Q8TF17 1288 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 RIOK1Q9BRS2 568 aaKnown RBP13.51□□□□□ -0.25
ABCD4-221ENST00000554453 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 SAP30BPQ9UHR5 308 aaKnown RBP13.51□□□□□ -0.25
ABCD4-221ENST00000554453 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 MYH1P12882 1939 aa13.51□□□□□ -0.25
ABCD4-221ENST00000554453 MYPNQ86TC9 1320 aa13.5□□□□□ -0.25
ABCD4-221ENST00000554453 USP17L10C9JJH3 530 aa13.5□□□□□ -0.25
ABCD4-221ENST00000554453 GCLCP48506 637 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-221ENST00000554453 FAM110CQ1W6H9 321 aa13.5□□□□□ -0.25
ABCD4-221ENST00000554453 SLC9C2Q5TAH2 1124 aa13.5□□□□□ -0.25
ABCD4-221ENST00000554453 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
ABCD4-221ENST00000554453 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
ABCD4-221ENST00000554453 GABRQQ9UN88 632 aa13.5□□□□□ -0.25
ABCD4-221ENST00000554453 MGAMO43451 1857 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 ZSWIM8A7E2V4 1837 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 MAGEB6P1A0A0J9YX57 407 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 PDE6AP16499 860 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 ATP5JP18859 108 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 PRKCZQ05513 592 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms