RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 PERM1Q5SV97 790 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 DMRTC2Q8IXT2 367 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-226ENST00000554350 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 NSD2O96028 1365 aa8.18□□□□□ -1.1
ATXN3-226ENST00000554350 GLTPD2A6NH11 291 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 RGS9O75916 674 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-226ENST00000554350 CPB1P15086 417 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 MAP2K1Q02750 393 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-226ENST00000554350 DALRD3Q5D0E6 543 aaKnown RBP8.17□□□□□ -1.1
ATXN3-226ENST00000554350 DHX32Q7L7V1 743 aaKnown RBP8.17□□□□□ -1.1
ATXN3-226ENST00000554350 KRT25Q7Z3Z0 450 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 FAM35AQ86V20 835 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 AMIGO3Q86WK7 504 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 ANKRD24Q8TF21 1146 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 SSBP4Q9BWG4 385 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-226ENST00000554350 C11orf16Q9NQ32 467 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 CCDC87Q9NVE4 849 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 FRRS1LQ9P0K9 344 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 PIM2Q9P1W9 311 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 NSD3Q9BZ95 1437 aa8.17□□□□□ -1.1
ATXN3-226ENST00000554350 SASH3O75995 380 aa8.16□□□□□ -1.1
ATXN3-226ENST00000554350 EPB42P16452 691 aa8.16□□□□□ -1.1
ATXN3-226ENST00000554350 RAC1P63000 192 aa8.16□□□□□ -1.1
ATXN3-226ENST00000554350 C11orf91Q3C1V1 193 aa8.16□□□□□ -1.1
ATXN3-226ENST00000554350 PRSS36Q5K4E3 855 aa8.16□□□□□ -1.1
ATXN3-226ENST00000554350 TXNRD3Q86VQ6 643 aa8.16□□□□□ -1.1
ATXN3-226ENST00000554350 PALLDQ8WX93 1383 aa8.15□□□□□ -1.1
ATXN3-226ENST00000554350 GPLD1P80108 840 aa8.15□□□□□ -1.1
ATXN3-226ENST00000554350 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-226ENST00000554350 CDCA8Q53HL2 280 aa8.15□□□□□ -1.1
ATXN3-226ENST00000554350 MCOLN1Q9GZU1 580 aa8.15□□□□□ -1.1
ATXN3-226ENST00000554350 C4BP0C0L5 1744 aa8.15□□□□□ -1.11
ATXN3-226ENST00000554350 KIAA1551Q9HCM1 1747 aa8.15□□□□□ -1.11
ATXN3-226ENST00000554350 TMEM88BA6NKF7 163 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 EGFRP00533 1210 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 SSFA2P28290 1259 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 SOX10P56693 466 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 GRM1Q13255 1194 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 FAM200AQ8TCP9 573 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 TTC9Q92623 222 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-226ENST00000554350 RTCBQ9Y3I0 505 aaKnown RBP8.14□□□□□ -1.11
ATXN3-226ENST00000554350 KIF13BQ9NQT8 1826 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 ARFGEF1Q9Y6D6 1849 aa8.14□□□□□ -1.11
ATXN3-226ENST00000554350 TAF1LQ8IZX4 1826 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 RARAP10276 462 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 TRIM26Q12899 539 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-226ENST00000554350 FAM26DQ5JW98 314 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 COX20Q5RI15 118 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 FBXO11Q86XK2 927 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 KCNMB2Q9Y691 235 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 QRICH2Q9H0J4 1663 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 SBF1O95248 1867 aa8.13□□□□□ -1.11
ATXN3-226ENST00000554350 TOGARAM1Q9Y4F4 1720 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 WDR33Q9C0J8 1336 aaKnown RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 LMNB1P20700 586 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 TMF1P82094 1093 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 PCSK7Q16549 785 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 OCLNQ16625 522 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 DEFB115Q30KQ5 88 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 MPRIPQ6WCQ1 1025 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 TREML1Q86YW5 311 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 DTWD1Q8N5C7 304 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 ZCRB1Q8TBF4 217 aaKnown RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 ABT1Q9ULW3 272 aaKnown RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 UBR3Q6ZT12 1888 aa8.12□□□□□ -1.11
ATXN3-226ENST00000554350 VIRMAQ69YN4 1812 aaKnown RBP8.12□□□□□ -1.11
ATXN3-226ENST00000554350 TNRC18O15417 2968 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-226ENST00000554350 BRCA1P38398 1863 aaKnown RBP8.11□□□□□ -1.11
ATXN3-226ENST00000554350 TTC21BQ7Z4L5 1316 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 KCNA3P22001 575 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 NRLP54845 237 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 NLGN1Q8N2Q7 840 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 PRIMPOLQ96LW4 560 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 TLR7Q9NYK1 1049 aaKnown RBP8.11□□□□□ -1.11
ATXN3-226ENST00000554350 NFAT5O94916 1531 aa8.11□□□□□ -1.11
ATXN3-226ENST00000554350 DLL1O00548 723 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 CHRNA5P30532 468 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 ETFBKMTQ8IXQ9 262 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 SMARCC1Q92922 1105 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-226ENST00000554350 VTI1AQ96AJ9 217 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 GCC1Q96CN9 775 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 MPHOSPH9Q99550 1183 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
ATXN3-226ENST00000554350 SMG9Q9H0W8 520 aaKnown RBP8.1□□□□□ -1.11
ATXN3-226ENST00000554350 TIAM2Q8IVF5 1701 aa8.09□□□□□ -1.11
ATXN3-226ENST00000554350 XYLBO75191 536 aa8.09□□□□□ -1.11
ATXN3-226ENST00000554350 HOXD8P13378 290 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-226ENST00000554350 ARTNQ5T4W7 220 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms