RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
NEDD1-206ENST00000554226 ZNF521Q96K83 1311 aa17.26■□□□□ 0.35
NEDD1-206ENST00000554226 PHKA1P46020 1223 aa17.26■□□□□ 0.35
NEDD1-206ENST00000554226 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-206ENST00000554226 UBE2OQ9C0C9 1292 aaKnown RBP17.26■□□□□ 0.35
NEDD1-206ENST00000554226 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
NEDD1-206ENST00000554226 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
NEDD1-206ENST00000554226 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
NEDD1-206ENST00000554226 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
NEDD1-206ENST00000554226 MAP4K4O95819 1239 aaPredicted RBP17.25■□□□□ 0.35
NEDD1-206ENST00000554226 TRIM32Q13049 653 aa17.25■□□□□ 0.35
NEDD1-206ENST00000554226 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.35
NEDD1-206ENST00000554226 SH3D19Q5HYK7 790 aa17.25■□□□□ 0.35
NEDD1-206ENST00000554226 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 PFASO15067 1338 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 COL6A1P12109 1028 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 XRCC5P13010 732 aaKnown RBP17.24■□□□□ 0.35
NEDD1-206ENST00000554226 IL15P40933 162 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-206ENST00000554226 RHBDL3P58872 404 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 CCDC102BQ68D86 513 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
NEDD1-206ENST00000554226 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
NEDD1-206ENST00000554226 VCANP13611 3396 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 BTDP43251 543 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 SPP2Q13103 211 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 SPTY2D1Q68D10 685 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-206ENST00000554226 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
NEDD1-206ENST00000554226 TRIB2Q92519 343 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 GUCD1Q96NT3 240 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 ASCC2Q9H1I8 757 aaPredicted RBP17.23■□□□□ 0.35
NEDD1-206ENST00000554226 FRMPD3Q5JV73 1810 aa17.23■□□□□ 0.35
NEDD1-206ENST00000554226 SIPA1L1O43166 1804 aa17.22■□□□□ 0.35
NEDD1-206ENST00000554226 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
NEDD1-206ENST00000554226 FAM109BQ6ICB4 259 aaPredicted RBP17.22■□□□□ 0.35
NEDD1-206ENST00000554226 CCDC84Q86UT8 332 aaPredicted RBP17.22■□□□□ 0.35
NEDD1-206ENST00000554226 MAST2Q6P0Q8 1798 aa17.22■□□□□ 0.35
NEDD1-206ENST00000554226 DNAH12Q6ZR08 3092 aa17.22■□□□□ 0.35
NEDD1-206ENST00000554226 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.35
NEDD1-206ENST00000554226 ZNF384Q8TF68 577 aa17.21■□□□□ 0.35
NEDD1-206ENST00000554226 SOCS4Q8WXH5 440 aa17.21■□□□□ 0.35
NEDD1-206ENST00000554226 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
NEDD1-206ENST00000554226 SPTBN5Q9NRC6 3674 aaKnown RBP17.2■□□□□ 0.34
NEDD1-206ENST00000554226 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
NEDD1-206ENST00000554226 CAP2P40123 477 aa17.2■□□□□ 0.34
NEDD1-206ENST00000554226 HMGCS2P54868 508 aa17.2■□□□□ 0.34
NEDD1-206ENST00000554226 PICALMQ13492 652 aa17.2■□□□□ 0.34
NEDD1-206ENST00000554226 SSH1Q8WYL5 1049 aa17.2■□□□□ 0.34
NEDD1-206ENST00000554226 WDR18Q9BV38 432 aa17.2■□□□□ 0.34
NEDD1-206ENST00000554226 SIL1Q9H173 461 aa17.2■□□□□ 0.34
NEDD1-206ENST00000554226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
NEDD1-206ENST00000554226 FOCADQ5VW36 1801 aa17.19■□□□□ 0.34
NEDD1-206ENST00000554226 USP17L5A8MUK1 530 aa17.19■□□□□ 0.34
NEDD1-206ENST00000554226 PRKAR2AP13861 404 aaKnown RBP17.19■□□□□ 0.34
NEDD1-206ENST00000554226 ADORA1P30542 326 aa17.19■□□□□ 0.34
NEDD1-206ENST00000554226 MECOMQ03112 1051 aa17.19■□□□□ 0.34
NEDD1-206ENST00000554226 USP6NLQ92738 828 aa17.19■□□□□ 0.34
NEDD1-206ENST00000554226 ABCF2Q9UG63 623 aa17.19■□□□□ 0.34
NEDD1-206ENST00000554226 HERC5Q9UII4 1024 aaKnown RBP17.19■□□□□ 0.34
NEDD1-206ENST00000554226 UBTFL1P0CB47 393 aaPredicted RBP17.18■□□□□ 0.34
NEDD1-206ENST00000554226 AS3MTQ9HBK9 375 aa17.18■□□□□ 0.34
NEDD1-206ENST00000554226 CDK5RAP2Q96SN8 1893 aa17.18■□□□□ 0.34
NEDD1-206ENST00000554226 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 MDM2Q00987 491 aaPredicted RBP17.17■□□□□ 0.34
NEDD1-206ENST00000554226 RRP1BQ14684 758 aaKnown RBP17.17■□□□□ 0.34
NEDD1-206ENST00000554226 LRRC26Q2I0M4 334 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 ALDH1L2Q3SY69 923 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 LHX8Q68G74 356 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 ERICH6Q7L0X2 663 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
NEDD1-206ENST00000554226 LDHCP07864 332 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 MAPK4P31152 587 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 BACE1P56817 501 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 GSTO1P78417 241 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
NEDD1-206ENST00000554226 METTL16Q86W50 562 aaKnown RBP17.16■□□□□ 0.34
NEDD1-206ENST00000554226 GPRC5AQ8NFJ5 357 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 NSUN4Q96CB9 384 aaKnown RBP17.16■□□□□ 0.34
NEDD1-206ENST00000554226 GINM1Q9NU53 330 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 LTBP2Q14767 1821 aa17.16■□□□□ 0.34
NEDD1-206ENST00000554226 EYSQ5T1H1 3165 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 A0A1B0GUL7 405 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 ASNSP08243 561 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 CYP2B6P20813 491 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 TIMM10P62072 90 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 HERVK_113P62684 666 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 IRX3P78415 501 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-206ENST00000554226 CACNB2Q08289 660 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-206ENST00000554226 GTF3C2Q8WUA4 911 aaPredicted RBP17.15■□□□□ 0.34
NEDD1-206ENST00000554226 FAM161BQ96MY7 647 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 DHX36Q9H2U1 1008 aaKnown RBP17.15■□□□□ 0.34
NEDD1-206ENST00000554226 TXNRD2Q9NNW7 524 aa17.15■□□□□ 0.34
NEDD1-206ENST00000554226 C19orf81C9J6K1 198 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
NEDD1-206ENST00000554226 MTMR2Q13614 643 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 MORN1Q5T089 497 aa17.14■□□□□ 0.33
NEDD1-206ENST00000554226 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms