RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TTBK2Q6IQ55 1244 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 MPRIPQ6WCQ1 1025 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 NPAS4Q8IUM7 802 aa7.31□□□□□ -1.24
SCFD1-210ENST00000553693 RPS26P62854 115 aaKnown RBP7.3□□□□□ -1.24
SCFD1-210ENST00000553693 CDC37L1Q7L3B6 337 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 HDXQ7Z353 690 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 TP53INP2Q8IXH6 220 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 NETO1Q8TDF5 533 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 MKNK2Q9HBH9 465 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 CSADQ9Y600 493 aa7.3□□□□□ -1.24
SCFD1-210ENST00000553693 NTF4P34130 210 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 ITGAEP38570 1179 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 RING1Q06587 406 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 PSMD2Q13200 908 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 DNAJC14Q6Y2X3 702 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-210ENST00000553693 C12orf40Q86WS4 652 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 GAL3ST3Q96A11 431 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 PARP2Q9UGN5 583 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 SLC5A6Q9Y289 635 aa7.29□□□□□ -1.24
SCFD1-210ENST00000553693 LEFTY1O75610 366 aa7.28□□□□□ -1.24
SCFD1-210ENST00000553693 ERCC3P19447 782 aa7.28□□□□□ -1.24
SCFD1-210ENST00000553693 IFI16Q16666 785 aaKnown RBP7.28□□□□□ -1.24
SCFD1-210ENST00000553693 NFXL1Q6ZNB6 911 aa7.28□□□□□ -1.24
SCFD1-210ENST00000553693 FAM181AQ8N9Y4 354 aa7.28□□□□□ -1.24
SCFD1-210ENST00000553693 ZNF507Q8TCN5 953 aa7.28□□□□□ -1.24
SCFD1-210ENST00000553693 PAK6Q9NQU5 681 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-210ENST00000553693 GTF2IRD1Q9UHL9 959 aa7.28□□□□□ -1.24
SCFD1-210ENST00000553693 PRAMEF27A3QJZ7 478 aa7.27□□□□□ -1.25
SCFD1-210ENST00000553693 RLBP1P12271 317 aa7.27□□□□□ -1.25
SCFD1-210ENST00000553693 DAB2P98082 770 aa7.27□□□□□ -1.25
SCFD1-210ENST00000553693 XPCQ01831 940 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-210ENST00000553693 DIEXFQ68CQ4 756 aaKnown RBP7.27□□□□□ -1.25
SCFD1-210ENST00000553693 LRFN4Q6PJG9 635 aa7.27□□□□□ -1.25
SCFD1-210ENST00000553693 PLD6Q8N2A8 252 aaKnown RBP7.27□□□□□ -1.25
SCFD1-210ENST00000553693 BCL7CQ8WUZ0 217 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-210ENST00000553693 PLPPR2Q96GM1 343 aa7.27□□□□□ -1.25
SCFD1-210ENST00000553693 PRDM10Q9NQV6 1147 aa7.27□□□□□ -1.25
SCFD1-210ENST00000553693 DBX1A6NMT0 343 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 CEACAM5P06731 702 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 LIG3P49916 1009 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 ST13P50502 369 aaKnown RBP7.26□□□□□ -1.25
SCFD1-210ENST00000553693 ZNF124Q15973 351 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 CCDC27Q2M243 656 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 WIPI1Q5MNZ9 446 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-210ENST00000553693 ZNF648Q5T619 568 aaPredicted RBP7.26□□□□□ -1.25
SCFD1-210ENST00000553693 ARMCX6Q7L4S7 300 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 CYFIP1Q7L576 1253 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 SNCAIPQ9Y6H5 919 aa7.26□□□□□ -1.25
SCFD1-210ENST00000553693 TMEM265A0A087WTH1 108 aa7.25□□□□□ -1.25
SCFD1-210ENST00000553693 IGF2BP3O00425 579 aaKnown RBP eCLIP7.25□□□□□ -1.25
SCFD1-210ENST00000553693 OXCT1P55809 520 aa7.25□□□□□ -1.25
SCFD1-210ENST00000553693 AGMOQ6ZNB7 445 aa7.25□□□□□ -1.25
SCFD1-210ENST00000553693 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
SCFD1-210ENST00000553693 RNF19AQ9NV58 838 aa7.25□□□□□ -1.25
SCFD1-210ENST00000553693 VAV3Q9UKW4 847 aa7.25□□□□□ -1.25
SCFD1-210ENST00000553693 LRIG2O94898 1065 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-210ENST00000553693 ITIH2P19823 946 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 ETF1P62495 437 aaKnown RBP7.24□□□□□ -1.25
SCFD1-210ENST00000553693 PRKCQQ04759 706 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 PTPN11Q06124 597 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-210ENST00000553693 INPP5AQ14642 412 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 MEI1Q5TIA1 1274 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 UBE3DQ7Z6J8 389 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 FBXO33Q7Z6M2 555 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 CRELD1Q96HD1 420 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 HRASLS5Q96KN8 279 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 NOC4LQ9BVI4 516 aaKnown RBP7.24□□□□□ -1.25
SCFD1-210ENST00000553693 WNT10AQ9GZT5 417 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 MIR1-1HGQ9H1L0 117 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 TACC3Q9Y6A5 838 aa7.24□□□□□ -1.25
SCFD1-210ENST00000553693 CAP2P40123 477 aa7.23□□□□□ -1.25
SCFD1-210ENST00000553693 SEPT6Q14141 434 aa7.23□□□□□ -1.25
SCFD1-210ENST00000553693 PLCL1Q15111 1095 aa7.23□□□□□ -1.25
SCFD1-210ENST00000553693 TAF1CQ15572 869 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-210ENST00000553693 MAP3K11Q16584 847 aa7.23□□□□□ -1.25
SCFD1-210ENST00000553693 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-210ENST00000553693 KRTAP9-3Q9BYQ3 159 aa7.23□□□□□ -1.25
SCFD1-210ENST00000553693 MRS2Q9HD23 443 aa7.23□□□□□ -1.25
SCFD1-210ENST00000553693 PRDM5Q9NQX1 630 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-210ENST00000553693 GNAT3A8MTJ3 354 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 ZNF574Q6ZN55 896 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-210ENST00000553693 HID1Q8IV36 788 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 FOXQ1Q9C009 403 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-210ENST00000553693 TNKS2Q9H2K2 1166 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 MAPK8IP1Q9UQF2 711 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 SNX11Q9Y5W9 270 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 U3KQE9 123 aa7.22□□□□□ -1.25
SCFD1-210ENST00000553693 SORBS3O60504 671 aa7.21□□□□□ -1.26
SCFD1-210ENST00000553693 ZNF746Q6NUN9 644 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-210ENST00000553693 SPRED2Q7Z698 418 aa7.21□□□□□ -1.26
SCFD1-210ENST00000553693 MFSD2AQ8NA29 543 aa7.21□□□□□ -1.26
SCFD1-210ENST00000553693 HEXIM2Q96MH2 286 aaKnown RBP7.21□□□□□ -1.26
SCFD1-210ENST00000553693 FBRSQ9HAH7 460 aa7.21□□□□□ -1.26
SCFD1-210ENST00000553693 VTI1BQ9UEU0 232 aa7.21□□□□□ -1.26
SCFD1-210ENST00000553693 PCDHB5Q9Y5E4 795 aa7.21□□□□□ -1.26
SCFD1-210ENST00000553693 TFE3P19532 575 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms