RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 USP6NLQ92738 828 aa12.08□□□□□ -0.48
CHD8-205ENST00000553651 CDX2Q99626 313 aaPredicted RBP12.08□□□□□ -0.48
CHD8-205ENST00000553651 ASCC2Q9H1I8 757 aaPredicted RBP12.08□□□□□ -0.48
CHD8-205ENST00000553651 PNMA3Q9UL41 463 aa12.08□□□□□ -0.48
CHD8-205ENST00000553651 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
CHD8-205ENST00000553651 LTBP2Q14767 1821 aa12.08□□□□□ -0.48
CHD8-205ENST00000553651 FRMPD3Q5JV73 1810 aa12.08□□□□□ -0.48
CHD8-205ENST00000553651 ZBTB22O15209 634 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 TBC1D12O60347 775 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 PEX10O60683 326 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 XRCC5P13010 732 aaKnown RBP12.07□□□□□ -0.48
CHD8-205ENST00000553651 SH3D19Q5HYK7 790 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 ATG9AQ7Z3C6 839 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 MAFAQ8NHW3 353 aaPredicted RBP12.07□□□□□ -0.48
CHD8-205ENST00000553651 LPIN2Q92539 896 aa12.07□□□□□ -0.48
CHD8-205ENST00000553651 FAM196BA6NMK8 535 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 SLC5A1P13866 664 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 CYP2B6P20813 491 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 CCND3P30281 292 aaPredicted RBP12.06□□□□□ -0.48
CHD8-205ENST00000553651 HMGCS2P54868 508 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 SPP2Q13103 211 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
CHD8-205ENST00000553651 SEMA6BQ9H3T3 888 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 TXNRD2Q9NNW7 524 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 ATAD5Q96QE3 1844 aa12.06□□□□□ -0.48
CHD8-205ENST00000553651 EYA2O00167 538 aa12.05□□□□□ -0.48
CHD8-205ENST00000553651 RHBDL3P58872 404 aa12.05□□□□□ -0.48
CHD8-205ENST00000553651 CCL14Q16627 93 aa12.05□□□□□ -0.48
CHD8-205ENST00000553651 ZSCAN29Q8IWY8 852 aaPredicted RBP12.05□□□□□ -0.48
CHD8-205ENST00000553651 ZNF280CQ8ND82 737 aa12.05□□□□□ -0.48
CHD8-205ENST00000553651 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
CHD8-205ENST00000553651 TTYH1Q9H313 450 aaPredicted RBP12.05□□□□□ -0.48
CHD8-205ENST00000553651 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
CHD8-205ENST00000553651 PHKA1P46020 1223 aa12.04□□□□□ -0.48
CHD8-205ENST00000553651 MORN1Q5T089 497 aa12.04□□□□□ -0.48
CHD8-205ENST00000553651 WDR63Q8IWG1 891 aa12.04□□□□□ -0.48
CHD8-205ENST00000553651 MYLIPQ8WY64 445 aa12.04□□□□□ -0.48
CHD8-205ENST00000553651 NUDT12Q9BQG2 462 aa12.04□□□□□ -0.48
CHD8-205ENST00000553651 USP44Q9H0E7 712 aa12.04□□□□□ -0.48
CHD8-205ENST00000553651 OSBPL5Q9H0X9 879 aaPredicted RBP12.04□□□□□ -0.48
CHD8-205ENST00000553651 SIPA1L1O43166 1804 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 SEMA3EO15041 775 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 NPM3O75607 178 aaKnown RBP12.03□□□□□ -0.48
CHD8-205ENST00000553651 COL9A1P20849 921 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 HOXA7P31268 230 aaPredicted RBP12.03□□□□□ -0.48
CHD8-205ENST00000553651 CAP2P40123 477 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 SHHQ15465 462 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 Q3C1V9 767 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 C9orf50Q5SZB4 431 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 P2RX7Q99572 595 aaKnown RBP12.03□□□□□ -0.48
CHD8-205ENST00000553651 PORCNQ9H237 461 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 RBPJLQ9UBG7 517 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 NCOR1O75376 2440 aa12.03□□□□□ -0.48
CHD8-205ENST00000553651 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 RLFQ13129 1914 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
CHD8-205ENST00000553651 BTDP43251 543 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 JAG1P78504 1218 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 PABPC4Q13310 644 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHD8-205ENST00000553651 PICALMQ13492 652 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 ATP2B3Q16720 1220 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 TRMT44Q8IYL2 757 aaKnown RBP12.02□□□□□ -0.49
CHD8-205ENST00000553651 TBC1D2Q9BYX2 928 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHD8-205ENST00000553651 RAPGEFL1Q9UHV5 662 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 DENND2AQ9ULE3 1009 aa12.02□□□□□ -0.49
CHD8-205ENST00000553651 GPR75-ASB3A0A0A6YYF3 556 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 IGHA2P01877 340 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 ADORA1P30542 326 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 HERVK_113P62684 666 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 RASGRF1Q13972 1273 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 GPR142Q7Z601 462 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 GPRC5AQ8NFJ5 357 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 LBHD1Q9BQE6 289 aaPredicted RBP12.01□□□□□ -0.49
CHD8-205ENST00000553651 WDR18Q9BV38 432 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 SENP6Q9GZR1 1112 aaPredicted RBP12.01□□□□□ -0.49
CHD8-205ENST00000553651 FLRT1Q9NZU1 646 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
CHD8-205ENST00000553651 PDS5AQ29RF7 1337 aaKnown RBP12.01□□□□□ -0.49
CHD8-205ENST00000553651 MAPK4P31152 587 aa12□□□□□ -0.49
CHD8-205ENST00000553651 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
CHD8-205ENST00000553651 SHROOM1Q2M3G4 852 aaPredicted RBP12□□□□□ -0.49
CHD8-205ENST00000553651 CCDC102BQ68D86 513 aa12□□□□□ -0.49
CHD8-205ENST00000553651 USP38Q8NB14 1042 aa12□□□□□ -0.49
CHD8-205ENST00000553651 APBA2Q99767 749 aa12□□□□□ -0.49
CHD8-205ENST00000553651 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
CHD8-205ENST00000553651 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 CIAO1O76071 339 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 RGS2P41220 211 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 ATN1P54259 1190 aaPredicted RBP11.99□□□□□ -0.49
CHD8-205ENST00000553651 BACE1P56817 501 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 RTP1P59025 263 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 ERVK-9P63128 1117 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 ERVK-24P63145 666 aa11.99□□□□□ -0.49
CHD8-205ENST00000553651 IRX3P78415 501 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms