RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 IRX6P78412 446 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-202ENST00000553619 NEXNQ0ZGT2 675 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 MVPQ14764 893 aaKnown RBP6.29□□□□□ -1.4
VTI1B-202ENST00000553619 CCDC102BQ68D86 513 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 KSR2Q6VAB6 950 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 ITPRIPQ8IWB1 547 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 RHPN1Q8TCX5 695 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 GLMNQ92990 594 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 CLUAP1Q96AJ1 413 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
VTI1B-202ENST00000553619 CRBNQ96SW2 442 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 TSPAN10Q9H1Z9 355 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-202ENST00000553619 CHPF2Q9P2E5 772 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 THSD7AQ9UPZ6 1657 aa6.29□□□□□ -1.4
VTI1B-202ENST00000553619 A0A087WZG4 1122 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 LOC102724428A0A0B4J2F2 783 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 SIN3BO75182 1162 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 GNAI3P08754 354 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 MYL6BP14649 208 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 SIK1P57059 783 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 PSMA6P60900 246 aaKnown RBP6.28□□□□□ -1.4
VTI1B-202ENST00000553619 AIMP1Q12904 312 aaKnown RBP6.28□□□□□ -1.4
VTI1B-202ENST00000553619 INTS3Q68E01 1043 aaKnown RBP6.28□□□□□ -1.4
VTI1B-202ENST00000553619 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 OGFOD1Q8N543 542 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 EXOC6Q8TAG9 804 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 PANK1Q8TE04 598 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 DNAAF4Q8WXU2 420 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 HSH2DQ96JZ2 352 aa6.28□□□□□ -1.4
VTI1B-202ENST00000553619 PHAXQ9H814 394 aaKnown RBP6.28□□□□□ -1.4
VTI1B-202ENST00000553619 MKRN1Q9UHC7 482 aaKnown RBP6.28□□□□□ -1.4
VTI1B-202ENST00000553619 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
VTI1B-202ENST00000553619 PI4KAP2A4QPH2 592 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 KCNQ2O43526 872 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 ALDH1L1O75891 902 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 A1BGP04217 495 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 CYP19A1P11511 503 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-202ENST00000553619 ITGB7P26010 798 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 IL6STP40189 918 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-202ENST00000553619 SF3B2Q13435 895 aaKnown RBP6.27□□□□□ -1.41
VTI1B-202ENST00000553619 DOC2BQ14184 412 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 C20orf194Q5TEA3 1177 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 SLC4A10Q6U841 1118 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 KIF6Q6ZMV9 814 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 COPS6Q7L5N1 327 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 G2E3Q7L622 706 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 RAB44Q7Z6P3 723 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-202ENST00000553619 DNAJC10Q8IXB1 793 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 TMEM57Q8N5G2 664 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 PI4KAP1Q8N8J0 262 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 PLBD2Q8NHP8 589 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 ZNF594Q96JF6 807 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-202ENST00000553619 SRCIN1Q9C0H9 1055 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 RWDD1Q9H446 243 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-202ENST00000553619 PALLDQ8WX93 1383 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 DOT1LQ8TEK3 1739 aa6.27□□□□□ -1.41
VTI1B-202ENST00000553619 ABCC4O15439 1325 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 UBR2Q8IWV8 1755 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 TOGARAM1Q9Y4F4 1720 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 PRAMEF22A3QJZ6 481 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 ADARB2-AS1A8MUL3 147 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 PLSCR1O15162 318 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 SPATA31C1P0DKV0 1188 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 RASA1P20936 1047 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 ALAS2P22557 587 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 SPEM2Q0P670 501 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 POTEAQ6S8J7 498 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 TSEN2Q8NCE0 465 aaKnown RBP6.26□□□□□ -1.41
VTI1B-202ENST00000553619 LINS1Q8NG48 757 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 ARXQ96QS3 562 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 METTL22Q9BUU2 404 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-202ENST00000553619 PHACTR1Q9C0D0 580 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 CCDC87Q9NVE4 849 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 RGS17Q9UGC6 210 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-202ENST00000553619 MAP3K2Q9Y2U5 619 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 STARD13Q9Y3M8 1113 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 HCN4Q9Y3Q4 1203 aa6.26□□□□□ -1.41
VTI1B-202ENST00000553619 PAPPAQ13219 1627 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 BRWD3Q6RI45 1802 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 SBF2Q86WG5 1849 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 SFI1A8K8P3 1242 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 ERVV-1B6SEH8 477 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 M0R082 166 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 M0R2N6 131 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 RPS6KA4O75676 772 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 TRIM37O94972 964 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 APBA3O96018 575 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 ALBP02768 609 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 ANXA1P04083 346 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 RLBP1P12271 317 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 HIRAP54198 1017 aaPredicted RBP6.25□□□□□ -1.41
VTI1B-202ENST00000553619 TYRO3Q06418 890 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 COL9A3Q14050 684 aaPredicted RBP6.25□□□□□ -1.41
VTI1B-202ENST00000553619 HIF1AQ16665 826 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 C8orf86Q6ZUL3 223 aa6.25□□□□□ -1.41
VTI1B-202ENST00000553619 RPAP2Q8IXW5 612 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms