RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CYP27A1Q02318 531 aa11.34□□□□□ -0.59
PCNX1-205ENST00000553508 CAMK2GQ13555 558 aaPredicted RBP11.34□□□□□ -0.59
PCNX1-205ENST00000553508 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
PCNX1-205ENST00000553508 TMEM87AQ8NBN3 555 aa11.34□□□□□ -0.59
PCNX1-205ENST00000553508 COPRSQ9NQ92 184 aa11.34□□□□□ -0.59
PCNX1-205ENST00000553508 FAM160A1Q05DH4 1040 aa11.33□□□□□ -0.6
PCNX1-205ENST00000553508 BNC2Q6ZN30 1099 aaPredicted RBP11.33□□□□□ -0.6
PCNX1-205ENST00000553508 TOP6BLQ8N6T0 577 aa11.33□□□□□ -0.6
PCNX1-205ENST00000553508 ZNF507Q8TCN5 953 aa11.33□□□□□ -0.6
PCNX1-205ENST00000553508 TMEM74Q96NL1 305 aa11.33□□□□□ -0.6
PCNX1-205ENST00000553508 RSRP1Q9BUV0 290 aa11.33□□□□□ -0.6
PCNX1-205ENST00000553508 FOSL1P15407 271 aa11.32□□□□□ -0.6
PCNX1-205ENST00000553508 TSNAXIP1Q2TAA8 658 aa11.32□□□□□ -0.6
PCNX1-205ENST00000553508 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
PCNX1-205ENST00000553508 RBM47A0AV96 593 aaKnown RBP11.31□□□□□ -0.6
PCNX1-205ENST00000553508 CYP27C1Q4G0S4 372 aa11.31□□□□□ -0.6
PCNX1-205ENST00000553508 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
PCNX1-205ENST00000553508 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
PCNX1-205ENST00000553508 WNT10AQ9GZT5 417 aa11.31□□□□□ -0.6
PCNX1-205ENST00000553508 FBRSQ9HAH7 460 aa11.31□□□□□ -0.6
PCNX1-205ENST00000553508 GFRA2O00451 464 aa11.3□□□□□ -0.6
PCNX1-205ENST00000553508 GRK4P32298 578 aa11.3□□□□□ -0.6
PCNX1-205ENST00000553508 LMNB2Q03252 620 aa11.3□□□□□ -0.6
PCNX1-205ENST00000553508 PWP1Q13610 501 aa11.3□□□□□ -0.6
PCNX1-205ENST00000553508 CPSF6Q16630 551 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCNX1-205ENST00000553508 KCT2Q8NC54 265 aa11.3□□□□□ -0.6
PCNX1-205ENST00000553508 GGT7Q9UJ14 662 aa11.3□□□□□ -0.6
PCNX1-205ENST00000553508 F13A1P00488 732 aa11.29□□□□□ -0.6
PCNX1-205ENST00000553508 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
PCNX1-205ENST00000553508 SNAP47Q5SQN1 464 aa11.29□□□□□ -0.6
PCNX1-205ENST00000553508 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
PCNX1-205ENST00000553508 PSMG3-AS1Q96PY0 264 aa11.29□□□□□ -0.6
PCNX1-205ENST00000553508 BACH2Q9BYV9 841 aa11.29□□□□□ -0.6
PCNX1-205ENST00000553508 NKG7Q16617 165 aa11.28□□□□□ -0.6
PCNX1-205ENST00000553508 XP32Q5T750 250 aa11.28□□□□□ -0.6
PCNX1-205ENST00000553508 FAM181AQ8N9Y4 354 aa11.28□□□□□ -0.6
PCNX1-205ENST00000553508 GOLM1Q8NBJ4 401 aa11.28□□□□□ -0.6
PCNX1-205ENST00000553508 RHOVQ96L33 236 aa11.28□□□□□ -0.6
PCNX1-205ENST00000553508 ZC3H7BQ9UGR2 993 aaKnown RBP11.28□□□□□ -0.6
PCNX1-205ENST00000553508 BPNT1O95861 308 aa11.27□□□□□ -0.61
PCNX1-205ENST00000553508 ARMCX6Q7L4S7 300 aa11.27□□□□□ -0.61
PCNX1-205ENST00000553508 HS2ST1Q7LGA3 356 aa11.27□□□□□ -0.61
PCNX1-205ENST00000553508 ERMP1Q7Z2K6 904 aa11.27□□□□□ -0.61
PCNX1-205ENST00000553508 PRDM10Q9NQV6 1147 aa11.27□□□□□ -0.61
PCNX1-205ENST00000553508 KIAA1324LA8MWY0 1029 aaPredicted RBP11.26□□□□□ -0.61
PCNX1-205ENST00000553508 PGRP06401 933 aa11.26□□□□□ -0.61
PCNX1-205ENST00000553508 LDLRAD1Q5T700 205 aa11.26□□□□□ -0.61
PCNX1-205ENST00000553508 HID1Q8IV36 788 aa11.26□□□□□ -0.61
PCNX1-205ENST00000553508 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
PCNX1-205ENST00000553508 SPINK2P20155 84 aa11.25□□□□□ -0.61
PCNX1-205ENST00000553508 SLBPQ14493 270 aaKnown RBP eCLIP11.25□□□□□ -0.61
PCNX1-205ENST00000553508 ARHGAP27Q6ZUM4 889 aa11.25□□□□□ -0.61
PCNX1-205ENST00000553508 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
PCNX1-205ENST00000553508 DTX1Q86Y01 620 aa11.25□□□□□ -0.61
PCNX1-205ENST00000553508 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
PCNX1-205ENST00000553508 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
PCNX1-205ENST00000553508 CORINQ9Y5Q5 1042 aa11.25□□□□□ -0.61
PCNX1-205ENST00000553508 FAM221AA4D161 298 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
PCNX1-205ENST00000553508 ADAMTS4O75173 837 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 CILPO75339 1184 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 LRIG2O94898 1065 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 MSMPQ1L6U9 139 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 RGS22Q8NE09 1264 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 U3KQE9 123 aa11.24□□□□□ -0.61
PCNX1-205ENST00000553508 FBXL19Q6PCT2 694 aa11.23□□□□□ -0.61
PCNX1-205ENST00000553508 FBXO27Q8NI29 283 aa11.23□□□□□ -0.61
PCNX1-205ENST00000553508 DPH2Q9BQC3 489 aaPredicted RBP11.23□□□□□ -0.61
PCNX1-205ENST00000553508 GRIN3BO60391 1043 aa11.22□□□□□ -0.61
PCNX1-205ENST00000553508 GARTP22102 1010 aa11.22□□□□□ -0.61
PCNX1-205ENST00000553508 EIF4A3P38919 411 aaKnown RBP11.22□□□□□ -0.61
PCNX1-205ENST00000553508 PDE4BQ07343 736 aa11.22□□□□□ -0.61
PCNX1-205ENST00000553508 PRAMEF13Q5VWM6 474 aa11.22□□□□□ -0.61
PCNX1-205ENST00000553508 MIPEPQ99797 713 aa11.22□□□□□ -0.61
PCNX1-205ENST00000553508 TJP2Q9UDY2 1190 aa11.22□□□□□ -0.61
PCNX1-205ENST00000553508 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
PCNX1-205ENST00000553508 PLCG1P19174 1290 aa11.21□□□□□ -0.61
PCNX1-205ENST00000553508 ZNF76P36508 570 aa11.21□□□□□ -0.61
PCNX1-205ENST00000553508 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
PCNX1-205ENST00000553508 HEXIM2Q96MH2 286 aaKnown RBP11.21□□□□□ -0.61
PCNX1-205ENST00000553508 TACC3Q9Y6A5 838 aa11.21□□□□□ -0.61
PCNX1-205ENST00000553508 SLITRK5O94991 958 aa11.2□□□□□ -0.62
PCNX1-205ENST00000553508 WNT11O96014 354 aa11.2□□□□□ -0.62
PCNX1-205ENST00000553508 ITIH2P19823 946 aa11.2□□□□□ -0.62
PCNX1-205ENST00000553508 ZNF296Q8WUU4 475 aaPredicted RBP11.2□□□□□ -0.62
PCNX1-205ENST00000553508 BSDC1Q9NW68 430 aaPredicted RBP11.2□□□□□ -0.62
PCNX1-205ENST00000553508 ANGEL1Q9UNK9 670 aaKnown RBP11.2□□□□□ -0.62
PCNX1-205ENST00000553508 EOMESO95936 686 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 FAM196AQ6ZSG2 479 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 MFSD2AQ8NA29 543 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 RIN3Q8TB24 985 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 ACSF2Q96CM8 615 aaPredicted RBP11.19□□□□□ -0.62
PCNX1-205ENST00000553508 MRRFQ96E11 262 aaKnown RBP11.19□□□□□ -0.62
PCNX1-205ENST00000553508 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 CCDC39Q9UFE4 941 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 ADAMTS1Q9UHI8 967 aa11.19□□□□□ -0.62
PCNX1-205ENST00000553508 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
PCNX1-205ENST00000553508 SUPT16HQ9Y5B9 1047 aaKnown RBP11.19□□□□□ -0.62
PCNX1-205ENST00000553508 CST3P01034 146 aaPredicted RBP11.18□□□□□ -0.62
PCNX1-205ENST00000553508 FAM214BQ7L5A3 538 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms