RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 KDM5AP29375 1690 aaKnown RBP6.74□□□□□ -1.33
ATXN3-220ENST00000553491 E9PSI1 815 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 EIF1AYO14602 144 aaKnown RBP6.74□□□□□ -1.33
ATXN3-220ENST00000553491 MAPK8P45983 427 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 SPRED3Q2MJR0 410 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 PRSS36Q5K4E3 855 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 ACAD11Q709F0 780 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 ASAP3Q8TDY4 903 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-220ENST00000553491 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-220ENST00000553491 ADGRB3O60242 1522 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 STRCP1A6NGW2 1772 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 RIMS2Q9UQ26 1411 aa6.74□□□□□ -1.33
ATXN3-220ENST00000553491 CHD2O14647 1828 aaKnown RBP6.73□□□□□ -1.33
ATXN3-220ENST00000553491 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 SCAF11Q99590 1463 aaKnown RBP6.73□□□□□ -1.33
ATXN3-220ENST00000553491 TMEM2Q9UHN6 1383 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 A0A096LPE4 126 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 A0A1W2PPZ6 126 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 C19orf57Q0VDD7 668 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 IKBKEQ14164 716 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 ARMC10Q8N2F6 343 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 SLC7A3Q8WY07 619 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 CSRNP1Q96S65 589 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 SETDB2Q96T68 719 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
ATXN3-220ENST00000553491 PPLO60437 1756 aa6.72□□□□□ -1.33
ATXN3-220ENST00000553491 FAM177BA6PVY3 158 aa6.72□□□□□ -1.33
ATXN3-220ENST00000553491 DLGAP3O95886 979 aa6.72□□□□□ -1.33
ATXN3-220ENST00000553491 NLRP12P59046 1061 aa6.72□□□□□ -1.33
ATXN3-220ENST00000553491 ENOX2Q16206 610 aaKnown RBP6.72□□□□□ -1.33
ATXN3-220ENST00000553491 ZNF423Q2M1K9 1284 aa6.72□□□□□ -1.33
ATXN3-220ENST00000553491 GLIS3Q8NEA6 775 aa6.72□□□□□ -1.33
ATXN3-220ENST00000553491 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
ATXN3-220ENST00000553491 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
ATXN3-220ENST00000553491 XIRP1Q702N8 1843 aaKnown RBP6.71□□□□□ -1.33
ATXN3-220ENST00000553491 CCDC144AA2RUR9 1427 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 LDHBP07195 334 aaKnown RBP6.71□□□□□ -1.34
ATXN3-220ENST00000553491 ITPKAP23677 461 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 FBXO41Q8TF61 875 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 ABCB6Q9NP58 842 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 RNF19AQ9NV58 838 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 SLIT1O75093 1534 aa6.71□□□□□ -1.34
ATXN3-220ENST00000553491 LOC100289279A0A1B0GTE1 492 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 GLB1P16278 677 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 ARL4DP49703 201 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 PRPF40BQ6NWY9 871 aaKnown RBP6.7□□□□□ -1.34
ATXN3-220ENST00000553491 EPS8L3Q8TE67 593 aaKnown RBP6.7□□□□□ -1.34
ATXN3-220ENST00000553491 TMPRSS13Q9BYE2 586 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-220ENST00000553491 ZNF576Q9H609 170 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 STK26Q9P289 416 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 TRPM2O94759 1503 aa6.7□□□□□ -1.34
ATXN3-220ENST00000553491 MED14O60244 1454 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 ARHGAP23Q9P227 1491 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 TOM1O60784 492 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 PRPF40AO75400 957 aaKnown RBP6.69□□□□□ -1.34
ATXN3-220ENST00000553491 KCNA6P17658 529 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 PCDH1Q08174 1060 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
ATXN3-220ENST00000553491 CEP41Q9BYV8 373 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 EHD4Q9H223 541 aa6.69□□□□□ -1.34
ATXN3-220ENST00000553491 CTSBP07858 339 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 PTPN12Q05209 780 aaKnown RBP6.68□□□□□ -1.34
ATXN3-220ENST00000553491 GRM2Q14416 872 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 UVSSAQ2YD98 709 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 SIN3AQ96ST3 1273 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 PARP2Q9UGN5 583 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 TBX22Q9Y458 520 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 RPGRIP1LQ68CZ1 1315 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 PLEKHG1Q9ULL1 1385 aa6.68□□□□□ -1.34
ATXN3-220ENST00000553491 IFT172Q9UG01 1749 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 B3GALT4O96024 378 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 PREPP48147 710 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 ATP2B2Q01814 1243 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 GSTM4Q03013 218 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 ANKRD34AQ69YU3 496 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 TMEM132EQ6IEE7 984 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 Q8N3U1 123 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 TRIM56Q9BRZ2 755 aaKnown RBP6.67□□□□□ -1.34
ATXN3-220ENST00000553491 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
ATXN3-220ENST00000553491 ZFYVE9O95405 1425 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms