RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 KIF23Q02241 960 aaPredicted RBP16.99■□□□□ 0.31
PTCH1-226ENST00000553011 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 SPRYD7Q5W111 196 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 WNK4Q96J92 1243 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
PTCH1-226ENST00000553011 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
PTCH1-226ENST00000553011 PI4KBQ9UBF8 816 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 CSADQ9Y600 493 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 SLC4A4Q9Y6R1 1079 aa16.99■□□□□ 0.31
PTCH1-226ENST00000553011 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
PTCH1-226ENST00000553011 GPAA1O43292 621 aa16.98■□□□□ 0.31
PTCH1-226ENST00000553011 TBC1D12O60347 775 aa16.98■□□□□ 0.31
PTCH1-226ENST00000553011 HLA-DOAP06340 250 aa16.98■□□□□ 0.31
PTCH1-226ENST00000553011 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
PTCH1-226ENST00000553011 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
PTCH1-226ENST00000553011 EVX2Q03828 476 aa16.97■□□□□ 0.31
PTCH1-226ENST00000553011 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
PTCH1-226ENST00000553011 OPTNQ96CV9 577 aa16.97■□□□□ 0.31
PTCH1-226ENST00000553011 DNAJC18Q9H819 358 aa16.97■□□□□ 0.31
PTCH1-226ENST00000553011 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
PTCH1-226ENST00000553011 HERC5Q9UII4 1024 aaKnown RBP16.97■□□□□ 0.31
PTCH1-226ENST00000553011 PTPRFP10586 1907 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-226ENST00000553011 CYP2D6P10635 497 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 PLCD1P51178 756 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 RRP1BQ14684 758 aaKnown RBP16.96■□□□□ 0.31
PTCH1-226ENST00000553011 NOL9Q5SY16 702 aaKnown RBP16.96■□□□□ 0.31
PTCH1-226ENST00000553011 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 METTL16Q86W50 562 aaKnown RBP16.96■□□□□ 0.31
PTCH1-226ENST00000553011 FOXP4Q8IVH2 680 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-226ENST00000553011 CRACR2BQ8N4Y2 399 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-226ENST00000553011 OTUD5Q96G74 571 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 FAM227BQ96M60 508 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 ATP8A2Q9NTI2 1148 aa16.96■□□□□ 0.31
PTCH1-226ENST00000553011 SPDYE5A6NIY4 337 aa16.95■□□□□ 0.3
PTCH1-226ENST00000553011 GSG1L2A8MUP6 293 aa16.95■□□□□ 0.3
PTCH1-226ENST00000553011 HSPA1AP0DMV8 641 aaKnown RBP16.95■□□□□ 0.3
PTCH1-226ENST00000553011 HSPA1BP0DMV9 641 aaKnown RBP16.95■□□□□ 0.3
PTCH1-226ENST00000553011 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-226ENST00000553011 TTC6Q86TZ1 520 aa16.95■□□□□ 0.3
PTCH1-226ENST00000553011 ERO1BQ86YB8 467 aa16.95■□□□□ 0.3
PTCH1-226ENST00000553011 TRIM34Q9BYJ4 488 aa16.95■□□□□ 0.3
PTCH1-226ENST00000553011 WBP1LQ9NX94 342 aa16.95■□□□□ 0.3
PTCH1-226ENST00000553011 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-226ENST00000553011 CYP2D7A0A087X1C5 515 aa16.94■□□□□ 0.3
PTCH1-226ENST00000553011 A0A0D9SFI3 127 aa16.94■□□□□ 0.3
PTCH1-226ENST00000553011 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
PTCH1-226ENST00000553011 SDSP20132 328 aa16.94■□□□□ 0.3
PTCH1-226ENST00000553011 MAP2K1Q02750 393 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-226ENST00000553011 NMIQ13287 307 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-226ENST00000553011 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
PTCH1-226ENST00000553011 EHD4Q9H223 541 aa16.94■□□□□ 0.3
PTCH1-226ENST00000553011 SERPINB13Q9UIV8 391 aa16.94■□□□□ 0.3
PTCH1-226ENST00000553011 USP17L12C9JPN9 530 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 USP17L21D6R901 530 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 SMIM22K7EJ46 135 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 CCDC84Q86UT8 332 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-226ENST00000553011 DDRGK1Q96HY6 314 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 EPB41L4AQ9HCS5 686 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-226ENST00000553011 HELLSQ9NRZ9 838 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
PTCH1-226ENST00000553011 APPP05067 770 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 GNAT2P19087 354 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 CAP2P40123 477 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 GABPAQ06546 454 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 PPIL2Q13356 520 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 SHROOM1Q2M3G4 852 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-226ENST00000553011 CTR9Q6PD62 1173 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 TICAM2Q86XR7 235 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 DYNLL2Q96FJ2 89 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 PICK1Q9NRD5 415 aa16.92■□□□□ 0.3
PTCH1-226ENST00000553011 MANSC4A6NHS7 340 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-226ENST00000553011 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
PTCH1-226ENST00000553011 IRF6O14896 467 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 GDF11O95390 407 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 PTPRAP18433 802 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 JAG1P78504 1218 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 PPATQ06203 517 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 MCMDC2Q4G0Z9 681 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 SLC44A5Q8NCS7 719 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 MS4A4AQ96JQ5 239 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
PTCH1-226ENST00000553011 FOXN1O15353 648 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 FOXP2O15409 715 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 SHMT1P34896 483 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 TM4SF4P48230 202 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 TDO2P48775 406 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 SREBF2Q12772 1141 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 VPS53Q5VIR6 699 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 ZNF589Q86UQ0 364 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-226ENST00000553011 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-226ENST00000553011 IFNL3Q8IZI9 196 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 BEGAINQ9BUH8 593 aa16.9■□□□□ 0.3
PTCH1-226ENST00000553011 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms