RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-218ENST00000552742 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
PFDN5-218ENST00000552742 INHBEP58166 350 aa11.86□□□□□ -0.51
PFDN5-218ENST00000552742 RRP1BQ14684 758 aaKnown RBP11.86□□□□□ -0.51
PFDN5-218ENST00000552742 FOXP4Q8IVH2 680 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-218ENST00000552742 PLEKHM2Q8IWE5 1019 aa11.86□□□□□ -0.51
PFDN5-218ENST00000552742 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
PFDN5-218ENST00000552742 PUS7LQ9H0K6 701 aaKnown RBP11.86□□□□□ -0.51
PFDN5-218ENST00000552742 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
PFDN5-218ENST00000552742 IRF6O14896 467 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 CA12O43570 354 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
PFDN5-218ENST00000552742 SREBF2Q12772 1141 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 PPIL2Q13356 520 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
PFDN5-218ENST00000552742 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-218ENST00000552742 METTL16Q86W50 562 aaKnown RBP11.85□□□□□ -0.51
PFDN5-218ENST00000552742 SDR42E1Q8WUS8 393 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 OSBP2Q969R2 916 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 PTPN18Q99952 460 aa11.85□□□□□ -0.51
PFDN5-218ENST00000552742 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-218ENST00000552742 IGF2BP3O00425 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
PFDN5-218ENST00000552742 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 POLR3DP05423 398 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-218ENST00000552742 CYP2D6P10635 497 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 PTPRAP18433 802 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 PLCD1P51178 756 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 GTF2A2P52657 109 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 JAG1P78504 1218 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 EVX2Q03828 476 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 PPATQ06203 517 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-218ENST00000552742 BRI3BPQ8WY22 251 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 STRBPQ96SI9 672 aaKnown RBP11.84□□□□□ -0.51
PFDN5-218ENST00000552742 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 R3HDMLQ9H3Y0 253 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 DCP1AQ9NPI6 582 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-218ENST00000552742 PICK1Q9NRD5 415 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 MCM9Q9NXL9 1143 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 HERC5Q9UII4 1024 aaKnown RBP11.84□□□□□ -0.51
PFDN5-218ENST00000552742 ZHX2Q9Y6X8 837 aa11.84□□□□□ -0.51
PFDN5-218ENST00000552742 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-218ENST00000552742 HLA-DOAP06340 250 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 ZFYP08048 801 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-218ENST00000552742 PDE4AP27815 886 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 CAP2P40123 477 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 CCL15Q16663 113 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 CCDC84Q86UT8 332 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-218ENST00000552742 APPBP2Q92624 585 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 EVI5LQ96CN4 794 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
PFDN5-218ENST00000552742 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 SAGE1Q9NXZ1 904 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 SLC4A4Q9Y6R1 1079 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 DOCK1Q14185 1865 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
PFDN5-218ENST00000552742 LAMB1P07942 1786 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 CYP2D7A0A087X1C5 515 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 SMIM22K7EJ46 135 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 M0R2C6 588 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 CETPP11597 493 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 SNAPC2Q13487 334 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 SHROOM1Q2M3G4 852 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-218ENST00000552742 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
PFDN5-218ENST00000552742 ZMYM1Q5SVZ6 1142 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 OSBPL3Q9H4L5 887 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 SERPINB13Q9UIV8 391 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 KCNH4Q9UQ05 1017 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
PFDN5-218ENST00000552742 GSG1L2A8MUP6 293 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 USP17L12C9JPN9 530 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 USP17L21D6R901 530 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 CXCL11O14625 94 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 GPAA1O43292 621 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 OTUD7BQ6GQQ9 843 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 DYNLL2Q96FJ2 89 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 EHD4Q9H223 541 aa11.81□□□□□ -0.52
PFDN5-218ENST00000552742 BTBD19C9JJ37 291 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 GDF11O95390 407 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 SHMT1P34896 483 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 SPP2Q13103 211 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 MOGSQ13724 837 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 CTR9Q6PD62 1173 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 FAM43AQ8N2R8 423 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 PTPRFP10586 1907 aa11.8□□□□□ -0.52
PFDN5-218ENST00000552742 TRIM75PA6NK02 468 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms