RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 PHKA1P46020 1223 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 LRIT3Q3SXY7 679 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 LPIN2Q92539 896 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 COA7Q96BR5 231 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 IDI2Q9BXS1 227 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 AGTPBP1Q9UPW5 1226 aa10.62□□□□□ -0.71
CDK4-213ENST00000552713 LRRFIP2Q9Y608 721 aaKnown RBP10.62□□□□□ -0.71
CDK4-213ENST00000552713 GAKO14976 1311 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 PFASO15067 1338 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 CTNND1O60716 968 aaKnown RBP10.61□□□□□ -0.71
CDK4-213ENST00000552713 ENTPD3O75355 529 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 HMGCRP04035 888 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 ADORA1P30542 326 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 PICALMQ13492 652 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 RRP1BQ14684 758 aaKnown RBP10.61□□□□□ -0.71
CDK4-213ENST00000552713 FAM110CQ1W6H9 321 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 ZSCAN29Q8IWY8 852 aaPredicted RBP10.61□□□□□ -0.71
CDK4-213ENST00000552713 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
CDK4-213ENST00000552713 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 TRIB2Q92519 343 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
CDK4-213ENST00000552713 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 SALL1Q9NSC2 1324 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 CAPN2P17655 700 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 SPP2Q13103 211 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 ATP2B3Q16720 1220 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
CDK4-213ENST00000552713 SIL1Q9H173 461 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 C11orf49Q9H6J7 331 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 HMX1Q9NP08 348 aaPredicted RBP10.6□□□□□ -0.71
CDK4-213ENST00000552713 OGDHLQ9ULD0 1010 aa10.6□□□□□ -0.71
CDK4-213ENST00000552713 LTBP2Q14767 1821 aa10.59□□□□□ -0.71
CDK4-213ENST00000552713 BTDP43251 543 aa10.59□□□□□ -0.71
CDK4-213ENST00000552713 HMGCS2P54868 508 aa10.59□□□□□ -0.71
CDK4-213ENST00000552713 ZNF384Q8TF68 577 aa10.59□□□□□ -0.71
CDK4-213ENST00000552713 GUCD1Q96NT3 240 aa10.59□□□□□ -0.71
CDK4-213ENST00000552713 FOCADQ5VW36 1801 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 CYP2B6P20813 491 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 RHBDL3P58872 404 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 MDM2Q00987 491 aaPredicted RBP10.58□□□□□ -0.72
CDK4-213ENST00000552713 RASGRF1Q13972 1273 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 LRRC26Q2I0M4 334 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 MAP3K21Q5TCX8 1036 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
CDK4-213ENST00000552713 ASCC2Q9H1I8 757 aaPredicted RBP10.58□□□□□ -0.72
CDK4-213ENST00000552713 MRS2Q9HD23 443 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 DENND2AQ9ULE3 1009 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 PA2G4Q9UQ80 394 aaKnown RBP10.58□□□□□ -0.72
CDK4-213ENST00000552713 RLFQ13129 1914 aa10.58□□□□□ -0.72
CDK4-213ENST00000552713 UNC80Q8N2C7 3258 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 COL2A1P02458 1487 aaPredicted RBP10.57□□□□□ -0.72
CDK4-213ENST00000552713 COL6A1P12109 1028 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 GCLCP48506 637 aaPredicted RBP10.57□□□□□ -0.72
CDK4-213ENST00000552713 CCDC102BQ68D86 513 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK4-213ENST00000552713 ZNF280CQ8ND82 737 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 FAM163AQ96GL9 167 aaPredicted RBP10.57□□□□□ -0.72
CDK4-213ENST00000552713 FAM161BQ96MY7 647 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK4-213ENST00000552713 TXNRD2Q9NNW7 524 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 GNL3LQ9NVN8 582 aaKnown RBP10.57□□□□□ -0.72
CDK4-213ENST00000552713 CEP126Q9P2H0 1117 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 PNMA3Q9UL41 463 aa10.57□□□□□ -0.72
CDK4-213ENST00000552713 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.57□□□□□ -0.72
CDK4-213ENST00000552713 GPR75-ASB3A0A0A6YYF3 556 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 SEMA3EO15041 775 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 TBC1D12O60347 775 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 CIAO1O76071 339 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
CDK4-213ENST00000552713 TIMM10P62072 90 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 JAG1P78504 1218 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 MECOMQ03112 1051 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 CACNB2Q08289 660 aaPredicted RBP10.56□□□□□ -0.72
CDK4-213ENST00000552713 CCL14Q16627 93 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 SHROOM1Q2M3G4 852 aaPredicted RBP10.56□□□□□ -0.72
CDK4-213ENST00000552713 POTEEQ6S8J3 1075 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 DZIP1Q86YF9 867 aaKnown RBP10.56□□□□□ -0.72
CDK4-213ENST00000552713 SSH1Q8WYL5 1049 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 P2RX7Q99572 595 aaKnown RBP10.56□□□□□ -0.72
CDK4-213ENST00000552713 OSBPL5Q9H0X9 879 aaPredicted RBP10.56□□□□□ -0.72
CDK4-213ENST00000552713 MORF4L1Q9UBU8 362 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 SMCHD1A6NHR9 2005 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 MYO9BQ13459 2157 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 MROH7-TTC4A0A0A0MT08 1334 aa10.56□□□□□ -0.72
CDK4-213ENST00000552713 MYH1P12882 1939 aa10.55□□□□□ -0.72
CDK4-213ENST00000552713 CAP2P40123 477 aa10.55□□□□□ -0.72
CDK4-213ENST00000552713 Q3C1V9 767 aa10.55□□□□□ -0.72
CDK4-213ENST00000552713 SH3D19Q5HYK7 790 aa10.55□□□□□ -0.72
CDK4-213ENST00000552713 PI16Q6UXB8 463 aa10.55□□□□□ -0.72
CDK4-213ENST00000552713 PTPRCP08575 1304 aa10.55□□□□□ -0.72
CDK4-213ENST00000552713 ZNFX1Q9P2E3 1918 aaKnown RBP10.54□□□□□ -0.72
CDK4-213ENST00000552713 USP17L5A8MUK1 530 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 MTMR2Q13614 643 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 TBC1D9Q6ZT07 1266 aa10.54□□□□□ -0.72
CDK4-213ENST00000552713 ZGPATQ8N5A5 531 aaKnown RBP10.54□□□□□ -0.72
CDK4-213ENST00000552713 USP6NLQ92738 828 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms