RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 UTYO14607 1347 aa15.95■□□□□ 0.14
CACNB3-221ENST00000552022 LDHBP07195 334 aaKnown RBP15.95■□□□□ 0.14
CACNB3-221ENST00000552022 CCND3P30281 292 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-221ENST00000552022 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
CACNB3-221ENST00000552022 SPP2Q13103 211 aa15.95■□□□□ 0.14
CACNB3-221ENST00000552022 SLC4A10Q6U841 1118 aa15.95■□□□□ 0.14
CACNB3-221ENST00000552022 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-221ENST00000552022 MYLIPQ8WY64 445 aa15.95■□□□□ 0.14
CACNB3-221ENST00000552022 DDX4Q9NQI0 724 aaKnown RBP15.95■□□□□ 0.14
CACNB3-221ENST00000552022 MORF4L1Q9UBU8 362 aa15.95■□□□□ 0.14
CACNB3-221ENST00000552022 RFX7Q2KHR2 1363 aa15.95■□□□□ 0.14
CACNB3-221ENST00000552022 XRCC5P13010 732 aaKnown RBP15.94■□□□□ 0.14
CACNB3-221ENST00000552022 HMGCS2P54868 508 aa15.94■□□□□ 0.14
CACNB3-221ENST00000552022 SYMPKQ92797 1274 aaKnown RBP15.94■□□□□ 0.14
CACNB3-221ENST00000552022 LBHD1Q9BQE6 289 aaPredicted RBP15.94■□□□□ 0.14
CACNB3-221ENST00000552022 PRKRIP1Q9H875 184 aaPredicted RBP15.94■□□□□ 0.14
CACNB3-221ENST00000552022 RAPGEFL1Q9UHV5 662 aa15.94■□□□□ 0.14
CACNB3-221ENST00000552022 PEX10O60683 326 aa15.93■□□□□ 0.14
CACNB3-221ENST00000552022 LPIN2Q92539 896 aa15.93■□□□□ 0.14
CACNB3-221ENST00000552022 NUDT12Q9BQG2 462 aa15.93■□□□□ 0.14
CACNB3-221ENST00000552022 TTYH1Q9H313 450 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-221ENST00000552022 SALL1Q9NSC2 1324 aa15.93■□□□□ 0.14
CACNB3-221ENST00000552022 TBC1D12O60347 775 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 SLC5A1P13866 664 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 PABPC4Q13310 644 aaKnown RBP eCLIP15.92■□□□□ 0.14
CACNB3-221ENST00000552022 SHHQ15465 462 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 CCL14Q16627 93 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 ZNF280CQ8ND82 737 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 USP6NLQ92738 828 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 SENP6Q9GZR1 1112 aaPredicted RBP15.92■□□□□ 0.14
CACNB3-221ENST00000552022 GAKO14976 1311 aa15.92■□□□□ 0.14
CACNB3-221ENST00000552022 FAM196BA6NMK8 535 aa15.91■□□□□ 0.14
CACNB3-221ENST00000552022 TRMT44Q8IYL2 757 aaKnown RBP15.91■□□□□ 0.14
CACNB3-221ENST00000552022 TXNRD2Q9NNW7 524 aa15.91■□□□□ 0.14
CACNB3-221ENST00000552022 RLFQ13129 1914 aa15.9■□□□□ 0.14
CACNB3-221ENST00000552022 ZKSCAN1P17029 563 aaPredicted RBP15.9■□□□□ 0.14
CACNB3-221ENST00000552022 PICALMQ13492 652 aa15.9■□□□□ 0.14
CACNB3-221ENST00000552022 RRP1BQ14684 758 aaKnown RBP15.9■□□□□ 0.14
CACNB3-221ENST00000552022 SH3D19Q5HYK7 790 aa15.9■□□□□ 0.14
CACNB3-221ENST00000552022 C9orf50Q5SZB4 431 aa15.9■□□□□ 0.14
CACNB3-221ENST00000552022 SOCS4Q8WXH5 440 aa15.9■□□□□ 0.14
CACNB3-221ENST00000552022 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
CACNB3-221ENST00000552022 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
CACNB3-221ENST00000552022 EYA2O00167 538 aa15.89■□□□□ 0.13
CACNB3-221ENST00000552022 TNFRSF10AO00220 468 aa15.89■□□□□ 0.13
CACNB3-221ENST00000552022 ATN1P54259 1190 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-221ENST00000552022 Q3C1V9 767 aa15.89■□□□□ 0.13
CACNB3-221ENST00000552022 GPRC5AQ8NFJ5 357 aa15.89■□□□□ 0.13
CACNB3-221ENST00000552022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.89■□□□□ 0.13
CACNB3-221ENST00000552022 FOSL2P15408 326 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 RFX5P48382 616 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-221ENST00000552022 MORN1Q5T089 497 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 FAM163AQ96GL9 167 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-221ENST00000552022 TBC1D2Q9BYX2 928 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 PORCNQ9H237 461 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 GNL3LQ9NVN8 582 aaKnown RBP15.88■□□□□ 0.13
CACNB3-221ENST00000552022 RBPJLQ9UBG7 517 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 DENND2AQ9ULE3 1009 aa15.88■□□□□ 0.13
CACNB3-221ENST00000552022 USP17L5A8MUK1 530 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 MAPK4P31152 587 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 HOXA7P31268 230 aaPredicted RBP15.87■□□□□ 0.13
CACNB3-221ENST00000552022 CAP2P40123 477 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 RGS2P41220 211 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 BTDP43251 543 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 RTP1P59025 263 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 SMAD3P84022 425 aaKnown RBP15.87■□□□□ 0.13
CACNB3-221ENST00000552022 PDE3AQ14432 1141 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 POTEEQ6S8J3 1075 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 PRKAG2Q9UGJ0 569 aa15.87■□□□□ 0.13
CACNB3-221ENST00000552022 PHKA1P46020 1223 aa15.86■□□□□ 0.13
CACNB3-221ENST00000552022 RHBDL3P58872 404 aa15.86■□□□□ 0.13
CACNB3-221ENST00000552022 HERVK_113P62684 666 aa15.86■□□□□ 0.13
CACNB3-221ENST00000552022 IRX3P78415 501 aaPredicted RBP15.86■□□□□ 0.13
CACNB3-221ENST00000552022 TJAP1Q5JTD0 557 aa15.86■□□□□ 0.13
CACNB3-221ENST00000552022 GPR142Q7Z601 462 aa15.86■□□□□ 0.13
CACNB3-221ENST00000552022 USP38Q8NB14 1042 aa15.86■□□□□ 0.13
CACNB3-221ENST00000552022 SEMA3EO15041 775 aa15.85■□□□□ 0.13
CACNB3-221ENST00000552022 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
CACNB3-221ENST00000552022 ATP2B3Q16720 1220 aa15.85■□□□□ 0.13
CACNB3-221ENST00000552022 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
CACNB3-221ENST00000552022 DZIP1Q86YF9 867 aaKnown RBP15.85■□□□□ 0.13
CACNB3-221ENST00000552022 APBA2Q99767 749 aa15.85■□□□□ 0.13
CACNB3-221ENST00000552022 FLRT1Q9NZU1 646 aa15.85■□□□□ 0.13
CACNB3-221ENST00000552022 GPR75-ASB3A0A0A6YYF3 556 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 PLA2G5P39877 138 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 BACE1P56817 501 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 ERVK-9P63128 1117 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 ERVK-24P63145 666 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 MTMR2Q13614 643 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 CCDC184Q52MB2 194 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 PLEKHH3Q7Z736 793 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 WDR63Q8IWG1 891 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
CACNB3-221ENST00000552022 LPAR1Q92633 364 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 BADQ92934 168 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 WDR18Q9BV38 432 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 USP44Q9H0E7 712 aa15.84■□□□□ 0.13
CACNB3-221ENST00000552022 DDX20Q9UHI6 824 aaKnown RBP15.84■□□□□ 0.13
CACNB3-221ENST00000552022 NCOR1O75376 2440 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms