RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 LMOD3Q0VAK6 560 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 MTFR1Q15390 333 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 NEUROD2Q15784 382 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 CCL15Q16663 113 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 DUSP27Q5VZP5 1158 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 HOMEZQ8IX15 550 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 ANKRD13AQ8IZ07 590 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 CCDC191Q8NCU4 936 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 OPTNQ96CV9 577 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 PRO3102Q9H379 93 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 GREM2Q9H772 168 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 BSDC1Q9NW68 430 aaPredicted RBP6.94□□□□□ -1.3
HOXB3-213ENST00000552000 CWC25Q9NXE8 425 aaPredicted RBP6.94□□□□□ -1.3
HOXB3-213ENST00000552000 PPP2R3BQ9Y5P8 575 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 PIEZO1Q92508 2521 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 ZNF804BA4D1E1 1349 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 AOX1Q06278 1338 aa6.94□□□□□ -1.3
HOXB3-213ENST00000552000 MYO1BO43795 1136 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 HOXB7P09629 217 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 CTSWP56202 376 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 RASA3Q14644 834 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 CFAP100Q494V2 611 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 FAM43AQ8N2R8 423 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 CERS5Q8N5B7 392 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 PRMT6Q96LA8 375 aaPredicted RBP6.93□□□□□ -1.3
HOXB3-213ENST00000552000 PHAXQ9H814 394 aaKnown RBP6.93□□□□□ -1.3
HOXB3-213ENST00000552000 LEMD3Q9Y2U8 911 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 NR2E3Q9Y5X4 410 aa6.93□□□□□ -1.3
HOXB3-213ENST00000552000 BDP1A6H8Y1 2624 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 ZBTB7BO15156 539 aaPredicted RBP6.92□□□□□ -1.3
HOXB3-213ENST00000552000 KCNJ4P48050 445 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 MMP16P51512 607 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 GTF2A2P52657 109 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 LACTBP83111 547 aaPredicted RBP6.92□□□□□ -1.3
HOXB3-213ENST00000552000 KIF22Q14807 665 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 MTMR14Q8NCE2 650 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 TTLL11Q8NHH1 800 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 HTATIP2Q9BUP3 242 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 CD209Q9NNX6 404 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 JAG2Q9Y219 1238 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 DNAH12Q6ZR08 3092 aa6.92□□□□□ -1.3
HOXB3-213ENST00000552000 AK9Q5TCS8 1911 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 SNAP23O00161 211 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 TLR2O60603 784 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 WDHD1O75717 1129 aaPredicted RBP6.91□□□□□ -1.3
HOXB3-213ENST00000552000 IGHMBP2P38935 993 aaKnown RBP6.91□□□□□ -1.3
HOXB3-213ENST00000552000 RBM5P52756 815 aaKnown RBP eCLIP6.91□□□□□ -1.3
HOXB3-213ENST00000552000 WNT7BP56706 349 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.91□□□□□ -1.3
HOXB3-213ENST00000552000 UBE2Q1Q7Z7E8 422 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 CCDC146Q8IYE0 955 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 METTL22Q9BUU2 404 aaPredicted RBP6.91□□□□□ -1.3
HOXB3-213ENST00000552000 ANKRD2Q9GZV1 360 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 TSHZ2Q9NRE2 1034 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 BIN2Q9UBW5 565 aaPredicted RBP6.91□□□□□ -1.3
HOXB3-213ENST00000552000 ALPK3Q96L96 1907 aa6.91□□□□□ -1.3
HOXB3-213ENST00000552000 A0A1W2PPC1 479 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 BTBD19C9JJ37 291 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 ELL2O00472 640 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-213ENST00000552000 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-213ENST00000552000 GJB1P08034 283 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 BMP1P13497 986 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 CCL5P13501 91 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 CTGFP29279 349 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 GRK4P32298 578 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 GJA8P48165 433 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 PRMT2P55345 433 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 VGLL4Q14135 290 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-213ENST00000552000 RAET1EQ8TD07 263 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 RNF208Q9H0X6 261 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 MBIPQ9NS73 344 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 ZNF70Q9UC06 446 aaPredicted RBP6.9□□□□□ -1.3
HOXB3-213ENST00000552000 STAP2Q9UGK3 403 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 SRRDQ9UH36 339 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 MAP3K2Q9Y2U5 619 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 CSADQ9Y600 493 aa6.9□□□□□ -1.3
HOXB3-213ENST00000552000 TCP10L2B9ZVM9 353 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 H3BM21 787 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 CAPN5O15484 640 aaPredicted RBP6.89□□□□□ -1.31
HOXB3-213ENST00000552000 GNRH1P01148 92 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 IGKV5-2P06315 115 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 CETPP11597 493 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 ITGA6P23229 1130 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 PSMC4P43686 418 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 CHRNDQ07001 517 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 TNFAIP1Q13829 316 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 Q7L0L9 218 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 UBE3BQ7Z3V4 1068 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 DEFB123Q8N688 67 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.89□□□□□ -1.31
HOXB3-213ENST00000552000 NLRP7Q8WX94 980 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 TEPSINQ96N21 525 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 MPHOSPH8Q99549 860 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
HOXB3-213ENST00000552000 TMEM39BQ9GZU3 492 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 TDRD3Q9H7E2 651 aaKnown RBP6.89□□□□□ -1.31
HOXB3-213ENST00000552000 CPA4Q9UI42 421 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 RIPOR2Q9Y4F9 1068 aa6.89□□□□□ -1.31
HOXB3-213ENST00000552000 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms