RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 APBB1O00213 710 aa24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 IFIT2P09913 472 aaKnown RBP24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 HOXD10P28358 340 aa24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 TTF1Q15361 905 aaPredicted RBP24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 SLC9C1Q4G0N8 1177 aa24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 C17orf99Q6UX52 265 aa24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 CRACR2BQ8N4Y2 399 aaPredicted RBP24.73■■□□□ 1.55
SLC48A1-208ENST00000551301 RAB11FIP3O75154 756 aa24.72■■□□□ 1.55
SLC48A1-208ENST00000551301 MOGSQ13724 837 aa24.72■■□□□ 1.55
SLC48A1-208ENST00000551301 PDE3AQ14432 1141 aa24.72■■□□□ 1.55
SLC48A1-208ENST00000551301 MAPKAPK5Q8IW41 473 aa24.72■■□□□ 1.55
SLC48A1-208ENST00000551301 ARMC5Q96C12 935 aa24.72■■□□□ 1.55
SLC48A1-208ENST00000551301 SLC45A1Q9Y2W3 748 aa24.72■■□□□ 1.55
SLC48A1-208ENST00000551301 FAM196BA6NMK8 535 aa24.71■■□□□ 1.55
SLC48A1-208ENST00000551301 HLA-DOAP06340 250 aa24.71■■□□□ 1.55
SLC48A1-208ENST00000551301 FOXP4Q8IVH2 680 aaPredicted RBP24.71■■□□□ 1.55
SLC48A1-208ENST00000551301 TMEM106CQ9BVX2 250 aa24.71■■□□□ 1.55
SLC48A1-208ENST00000551301 AS3MTQ9HBK9 375 aa24.71■■□□□ 1.55
SLC48A1-208ENST00000551301 FLT1P17948 1338 aa24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 FMNL1O95466 1100 aaPredicted RBP24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 CAP2P40123 477 aa24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 GPAT2Q6NUI2 795 aa24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 ADGRA1Q86SQ6 560 aa24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 MAGEB6Q8N7X4 407 aa24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 SMCR8Q8TEV9 937 aaPredicted RBP24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 BCL11AQ9H165 835 aa24.7■■□□□ 1.54
SLC48A1-208ENST00000551301 USP17L5A8MUK1 530 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 SLURP2P0DP57 97 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 PSMC4P43686 418 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 USP5P45974 858 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 ZNF280CQ8ND82 737 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 PNMA3Q9UL41 463 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 PTCH2Q9Y6C5 1203 aa24.69■■□□□ 1.54
SLC48A1-208ENST00000551301 CYP2C8P10632 490 aa24.68■■□□□ 1.54
SLC48A1-208ENST00000551301 SPP2Q13103 211 aa24.68■■□□□ 1.54
SLC48A1-208ENST00000551301 PABPC4Q13310 644 aaKnown RBP eCLIP24.68■■□□□ 1.54
SLC48A1-208ENST00000551301 ARHGAP39Q9C0H5 1083 aa24.68■■□□□ 1.54
SLC48A1-208ENST00000551301 AGTPBP1Q9UPW5 1226 aa24.68■■□□□ 1.54
SLC48A1-208ENST00000551301 ASNSP08243 561 aa24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 FCGRTP55899 365 aa24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 CAP1Q01518 475 aa24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 MIGA1Q8NAN2 632 aa24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 PROCA1Q8NCQ7 364 aaPredicted RBP24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 GINM1Q9NU53 330 aa24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 PALD1Q9ULE6 856 aa24.67■■□□□ 1.54
SLC48A1-208ENST00000551301 KIAA0100Q14667 2235 aaKnown RBP24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 ADGRA2Q96PE1 1338 aa24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 DYNLL1P63167 89 aaKnown RBP24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 SAP30BPQ9UHR5 308 aaKnown RBP24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 NDUFB9Q9Y6M9 179 aa24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 MYO5AQ9Y4I1 1855 aaKnown RBP24.66■■□□□ 1.54
SLC48A1-208ENST00000551301 ECM2O94769 699 aaPredicted RBP24.65■■□□□ 1.54
SLC48A1-208ENST00000551301 SIRT2Q8IXJ6 389 aa24.65■■□□□ 1.54
SLC48A1-208ENST00000551301 RAET1EQ8TD07 263 aa24.65■■□□□ 1.54
SLC48A1-208ENST00000551301 ZNF333Q96JL9 665 aa24.65■■□□□ 1.54
SLC48A1-208ENST00000551301 ANTXR1Q9H6X2 564 aa24.65■■□□□ 1.54
SLC48A1-208ENST00000551301 SRRDQ9UH36 339 aa24.65■■□□□ 1.54
SLC48A1-208ENST00000551301 SLC4A8Q2Y0W8 1093 aa24.64■■□□□ 1.54
SLC48A1-208ENST00000551301 CCDC84Q86UT8 332 aaPredicted RBP24.64■■□□□ 1.54
SLC48A1-208ENST00000551301 TRIM47Q96LD4 638 aa24.64■■□□□ 1.54
SLC48A1-208ENST00000551301 DNAJC2Q99543 621 aaKnown RBP24.64■■□□□ 1.54
SLC48A1-208ENST00000551301 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.64■■□□□ 1.54
SLC48A1-208ENST00000551301 BCRP11274 1271 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 SLC9C2Q5TAH2 1124 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 TTC6Q86TZ1 520 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 METTL16Q86W50 562 aaKnown RBP24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 TMOD4Q9NZQ9 345 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 FOCADQ5VW36 1801 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 PHIPQ8WWQ0 1821 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 TNRC18O15417 2968 aaPredicted RBP24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 PTPRFP10586 1907 aa24.63■■□□□ 1.53
SLC48A1-208ENST00000551301 MAGEB6P1A0A0J9YX57 407 aa24.62■■□□□ 1.53
SLC48A1-208ENST00000551301 GOLIM4O00461 696 aa24.62■■□□□ 1.53
SLC48A1-208ENST00000551301 OSBPP22059 807 aa24.62■■□□□ 1.53
SLC48A1-208ENST00000551301 HMGCS2P54868 508 aa24.62■■□□□ 1.53
SLC48A1-208ENST00000551301 WDR18Q9BV38 432 aa24.62■■□□□ 1.53
SLC48A1-208ENST00000551301 MYPNQ86TC9 1320 aa24.61■■□□□ 1.53
SLC48A1-208ENST00000551301 ATAD5Q96QE3 1844 aa24.61■■□□□ 1.53
SLC48A1-208ENST00000551301 HTTP42858 3142 aa24.61■■□□□ 1.53
SLC48A1-208ENST00000551301 CRNKL1Q9BZJ0 848 aaKnown RBP24.61■■□□□ 1.53
SLC48A1-208ENST00000551301 LRRCC1Q9C099 1032 aa24.61■■□□□ 1.53
SLC48A1-208ENST00000551301 CDK5RAP2Q96SN8 1893 aa24.61■■□□□ 1.53
SLC48A1-208ENST00000551301 POTEFA5A3E0 1075 aa24.6■■□□□ 1.53
SLC48A1-208ENST00000551301 GCLCP48506 637 aaPredicted RBP24.6■■□□□ 1.53
SLC48A1-208ENST00000551301 TREML2Q5T2D2 321 aa24.6■■□□□ 1.53
SLC48A1-208ENST00000551301 SH3TC2Q8TF17 1288 aa24.6■■□□□ 1.53
SLC48A1-208ENST00000551301 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.6■■□□□ 1.53
SLC48A1-208ENST00000551301 SERPINB13Q9UIV8 391 aa24.6■■□□□ 1.53
SLC48A1-208ENST00000551301 C19orf81C9J6K1 198 aa24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 PDE6AP16499 860 aa24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 RRP1BQ14684 758 aaKnown RBP24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 SH3D19Q5HYK7 790 aa24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 C20orf194Q5TEA3 1177 aa24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 EHD4Q9H223 541 aa24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 BIN2Q9UBW5 565 aaPredicted RBP24.59■■□□□ 1.53
SLC48A1-208ENST00000551301 TNPO2O14787 897 aaKnown RBP24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 GDF11O95390 407 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 ATP5JP18859 108 aa24.58■■□□□ 1.53
SLC48A1-208ENST00000551301 GRK4P32298 578 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms