RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 PHKA1P46020 1223 aa12.78□□□□□ -0.36
BEST3-210ENST00000551160 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
BEST3-210ENST00000551160 RRP1BQ14684 758 aaKnown RBP12.78□□□□□ -0.36
BEST3-210ENST00000551160 CCL14Q16627 93 aa12.78□□□□□ -0.36
BEST3-210ENST00000551160 ZNF280CQ8ND82 737 aa12.78□□□□□ -0.36
BEST3-210ENST00000551160 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
BEST3-210ENST00000551160 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
BEST3-210ENST00000551160 MORF4L1Q9UBU8 362 aa12.78□□□□□ -0.36
BEST3-210ENST00000551160 BTDP43251 543 aa12.77□□□□□ -0.37
BEST3-210ENST00000551160 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
BEST3-210ENST00000551160 DZIP1Q86YF9 867 aaKnown RBP12.77□□□□□ -0.37
BEST3-210ENST00000551160 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.37
BEST3-210ENST00000551160 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.37
BEST3-210ENST00000551160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.77□□□□□ -0.37
BEST3-210ENST00000551160 DOCK2Q92608 1830 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 PTPRFP10586 1907 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
BEST3-210ENST00000551160 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
BEST3-210ENST00000551160 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.37
BEST3-210ENST00000551160 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 OSBPL5Q9H0X9 879 aaPredicted RBP12.76□□□□□ -0.37
BEST3-210ENST00000551160 SEMA6BQ9H3T3 888 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 GNL3LQ9NVN8 582 aaKnown RBP12.76□□□□□ -0.37
BEST3-210ENST00000551160 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
BEST3-210ENST00000551160 TBC1D12O60347 775 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 ADORA1P30542 326 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 ATN1P54259 1190 aaPredicted RBP12.75□□□□□ -0.37
BEST3-210ENST00000551160 RHBDL3P58872 404 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 MTMR2Q13614 643 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 PDE3AQ14432 1141 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 C9orf50Q5SZB4 431 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 EYSQ5T1H1 3165 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 WDR63Q8IWG1 891 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 GPRC5AQ8NFJ5 357 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 USP6NLQ92738 828 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 P2RX7Q99572 595 aaKnown RBP12.75□□□□□ -0.37
BEST3-210ENST00000551160 SENP6Q9GZR1 1112 aaPredicted RBP12.75□□□□□ -0.37
BEST3-210ENST00000551160 SIL1Q9H173 461 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 TTYH1Q9H313 450 aaPredicted RBP12.75□□□□□ -0.37
BEST3-210ENST00000551160 RAPGEFL1Q9UHV5 662 aa12.75□□□□□ -0.37
BEST3-210ENST00000551160 MROH7-TTC4A0A0A0MT08 1334 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 USP17L5A8MUK1 530 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 SEMA3EO15041 775 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 COL9A1P20849 921 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 CAP2P40123 477 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 SHHQ15465 462 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
BEST3-210ENST00000551160 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
BEST3-210ENST00000551160 APBA2Q99767 749 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 USP44Q9H0E7 712 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 PORCNQ9H237 461 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 ABCF2Q9UG63 623 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 LOC285556D6RIA3 1793 aa12.74□□□□□ -0.37
BEST3-210ENST00000551160 LAMA2P24043 3122 aaKnown RBP12.73□□□□□ -0.37
BEST3-210ENST00000551160 FOSL2P15408 326 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 MAPK4P31152 587 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 RGS2P41220 211 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 HERVK_113P62684 666 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 Q3C1V9 767 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 MORN1Q5T089 497 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
BEST3-210ENST00000551160 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
BEST3-210ENST00000551160 PRUNE2Q8WUY3 3088 aa12.73□□□□□ -0.37
BEST3-210ENST00000551160 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 RTP1P59025 263 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 ERVK-24P63145 666 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 JAG1P78504 1218 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 MECOMQ03112 1051 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 SHROOM1Q2M3G4 852 aaPredicted RBP12.72□□□□□ -0.37
BEST3-210ENST00000551160 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 FLRT1Q9NZU1 646 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 CEP126Q9P2H0 1117 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 RBPJLQ9UBG7 517 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 CACNA1FO60840 1977 aa12.72□□□□□ -0.37
BEST3-210ENST00000551160 CDH23Q9H251 3354 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 CIAO1O76071 339 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
BEST3-210ENST00000551160 BACE1P56817 501 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 PLEKHH3Q7Z736 793 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 SLF2Q8IX21 1173 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 USP38Q8NB14 1042 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 WDR18Q9BV38 432 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 PRKAG2Q9UGJ0 569 aa12.71□□□□□ -0.37
BEST3-210ENST00000551160 DDX20Q9UHI6 824 aaKnown RBP12.71□□□□□ -0.37
BEST3-210ENST00000551160 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms