RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 PROCA1Q8NCQ7 364 aaPredicted RBP14.39□□□□□ -0.11
GPN3-208ENST00000550974 ZNF594Q96JF6 807 aaPredicted RBP14.39□□□□□ -0.11
GPN3-208ENST00000550974 PBX4Q9BYU1 374 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 A0A1B0GUL6 1792 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 MAST3O60307 1309 aa14.39□□□□□ -0.11
GPN3-208ENST00000550974 GRXCR1A8MXD5 290 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 MSCO60682 206 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
GPN3-208ENST00000550974 GCKRQ14397 625 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 TAF7LQ5H9L4 462 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 CDC42EP5Q6NZY7 148 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 CCAR1Q8IX12 1150 aaKnown RBP14.38□□□□□ -0.11
GPN3-208ENST00000550974 USP6NLQ92738 828 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 FAM198AQ9UFP1 575 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 DNAH12Q6ZR08 3092 aa14.38□□□□□ -0.11
GPN3-208ENST00000550974 FRMPD3Q5JV73 1810 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 SLURP2P0DP57 97 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 RAG1P15918 1043 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 CASP7P55210 303 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 FPGSQ05932 587 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 UBE4AQ14139 1066 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 GPRC5AQ8NFJ5 357 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 UIMC1Q96RL1 719 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 APBA2Q99767 749 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 SPINK5Q9NQ38 1064 aaPredicted RBP14.37□□□□□ -0.11
GPN3-208ENST00000550974 TACC3Q9Y6A5 838 aa14.37□□□□□ -0.11
GPN3-208ENST00000550974 PRR33A8MZF0 331 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 CTNND1O60716 968 aaKnown RBP14.36□□□□□ -0.11
GPN3-208ENST00000550974 TLE2Q04725 743 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 SPP2Q13103 211 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 SNX17Q15036 470 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 ARRDC4Q8NCT1 418 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 FERMT2Q96AC1 680 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 MBIPQ9NS73 344 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 PTPRFP10586 1907 aa14.36□□□□□ -0.11
GPN3-208ENST00000550974 ATRNL1Q5VV63 1379 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 NCOR1O75376 2440 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 MAPK4P31152 587 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 HMGCS2P54868 508 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 MORN1Q5T089 497 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 GPR142Q7Z601 462 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 ZSCAN29Q8IWY8 852 aaPredicted RBP14.35□□□□□ -0.11
GPN3-208ENST00000550974 TXNRD2Q9NNW7 524 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 USP40Q9NVE5 1235 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 FLRT1Q9NZU1 646 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 TRIM35Q9UPQ4 493 aa14.35□□□□□ -0.11
GPN3-208ENST00000550974 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 ERC2O15083 957 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 CLTBP09497 229 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 ADCYAP1R1P41586 468 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
GPN3-208ENST00000550974 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 ANO1Q5XXA6 986 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 FBXO33Q7Z6M2 555 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 EDC3Q96F86 508 aaKnown RBP14.34□□□□□ -0.11
GPN3-208ENST00000550974 FBXL18Q96ME1 805 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.34□□□□□ -0.11
GPN3-208ENST00000550974 PORCNQ9H237 461 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 CWC22Q9HCG8 908 aaKnown RBP14.34□□□□□ -0.11
GPN3-208ENST00000550974 CACNA1AO00555 2505 aa14.34□□□□□ -0.11
GPN3-208ENST00000550974 TLL1O43897 1013 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 FOXO4P98177 505 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 MAP2K5Q13163 448 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 Q3C1V9 767 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 PLEKHH3Q7Z736 793 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 ZNF280CQ8ND82 737 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 SUGT1Q9Y2Z0 365 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 UTYO14607 1347 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
GPN3-208ENST00000550974 RLFQ13129 1914 aa14.33□□□□□ -0.12
GPN3-208ENST00000550974 PHIPQ8WWQ0 1821 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 KIAA0355O15063 1070 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 DIXDC1Q155Q3 683 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 CAVIN4Q5BKX8 364 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 C1orf53Q5VUE5 145 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 NKX2-4Q9H2Z4 354 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 TMEM39AQ9NV64 488 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 MSRAQ9UJ68 235 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 NDUFB9Q9Y6M9 179 aa14.32□□□□□ -0.12
GPN3-208ENST00000550974 CYP2C19P33261 490 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 ATP2B2Q01814 1243 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 LMBR1LQ6UX01 489 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 SH3BP5LQ7L8J4 393 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 CCDC146Q8IYE0 955 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 TRPV1Q8NER1 839 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 SLC28A3Q9HAS3 691 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 RBPJLQ9UBG7 517 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 PLXNA1Q9UIW2 1896 aa14.31□□□□□ -0.12
GPN3-208ENST00000550974 DOCK1Q14185 1865 aa14.3□□□□□ -0.12
GPN3-208ENST00000550974 PQBP1O60828 265 aaKnown RBP14.3□□□□□ -0.12
GPN3-208ENST00000550974 RGS3P49796 1198 aa14.3□□□□□ -0.12
GPN3-208ENST00000550974 HERVK_113P62684 666 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms