RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 BRD4O60885 1362 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-213ENST00000550629 NOS3P29474 1203 aa7.88□□□□□ -1.15
SCAF11-213ENST00000550629 EHHADHQ08426 723 aa7.88□□□□□ -1.15
SCAF11-213ENST00000550629 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
SCAF11-213ENST00000550629 PMEPA1Q969W9 287 aa7.88□□□□□ -1.15
SCAF11-213ENST00000550629 TERF2IPQ9NYB0 399 aa7.88□□□□□ -1.15
SCAF11-213ENST00000550629 FOXD3Q9UJU5 478 aaPredicted RBP7.88□□□□□ -1.15
SCAF11-213ENST00000550629 DLL1O00548 723 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 EREGO14944 169 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 PHACTR2O75167 634 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 ARHGAP4P98171 946 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 SETDB1Q15047 1291 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 IGF2-ASQ6U949 168 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
SCAF11-213ENST00000550629 KRTAP4-9Q9BYQ8 210 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
SCAF11-213ENST00000550629 CPSF1Q10570 1443 aaKnown RBP7.86□□□□□ -1.15
SCAF11-213ENST00000550629 ANKRD36BQ8N2N9 1353 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 MYOM1P52179 1685 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 LINC01387J3KSC0 135 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 NFKBIEO00221 500 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 TRPA1O75762 1119 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 CDC27P30260 824 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 BRINP3Q76B58 766 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 SNX29Q8TEQ0 813 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 DZANK1Q9NVP4 752 aa7.86□□□□□ -1.15
SCAF11-213ENST00000550629 NPHP3Q7Z494 1330 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 COBLO75128 1261 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 CDC25BP30305 580 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 TXNDC11Q6PKC3 985 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 HDGFL2Q7Z4V5 671 aaPredicted RBP7.85□□□□□ -1.15
SCAF11-213ENST00000550629 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 ORAI2Q96SN7 254 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 SLC12A5Q9H2X9 1139 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
SCAF11-213ENST00000550629 BRPF3Q9ULD4 1205 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 CD163L1Q9NR16 1453 aa7.85□□□□□ -1.15
SCAF11-213ENST00000550629 ACEP12821 1306 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 MAP4K3Q8IVH8 894 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 NGDNQ8NEJ9 315 aaKnown RBP7.84□□□□□ -1.15
SCAF11-213ENST00000550629 MEGF10Q96KG7 1140 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 HHIPQ96QV1 700 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 KRTAP4-2Q9BYR5 136 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-213ENST00000550629 RNF112Q9ULX5 631 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 AHDC1Q5TGY3 1603 aaPredicted RBP7.84□□□□□ -1.15
SCAF11-213ENST00000550629 USP6P35125 1406 aa7.84□□□□□ -1.15
SCAF11-213ENST00000550629 EDC4Q6P2E9 1401 aaKnown RBP7.84□□□□□ -1.15
SCAF11-213ENST00000550629 A0A1W2PP64 1363 aa7.84□□□□□ -1.16
SCAF11-213ENST00000550629 KTN1Q86UP2 1357 aaKnown RBP7.84□□□□□ -1.16
SCAF11-213ENST00000550629 ROBO1Q9Y6N7 1651 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 NHSL1Q5SYE7 1610 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 PDE2AO00408 941 aaPredicted RBP7.83□□□□□ -1.16
SCAF11-213ENST00000550629 PTPRAP18433 802 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 EPHA1P21709 976 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 PRR23CQ6ZRP0 262 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 GALNT11Q8NCW6 608 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 OSMRQ99650 979 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 ADAM19Q9H013 955 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 AKTIPQ9H8T0 292 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 ZFYVE28Q9HCC9 887 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 SSH2Q76I76 1423 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 SBNO1A3KN83 1393 aa7.83□□□□□ -1.16
SCAF11-213ENST00000550629 TTC21AQ8NDW8 1320 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 PXDNQ92626 1479 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 RGPD8O14715 1765 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-213ENST00000550629 AKAP12Q02952 1782 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 NDUFB5O43674 189 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 BRD1O95696 1058 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 MON2Q7Z3U7 1717 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 PMFBP1Q8TBY8 1022 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 ZKSCAN3Q9BRR0 538 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 POLR3GLQ9BT43 218 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
SCAF11-213ENST00000550629 PANK3Q9H999 370 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 LATS2Q9NRM7 1088 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 NSD2O96028 1365 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 NPC1L1Q9UHC9 1359 aa7.82□□□□□ -1.16
SCAF11-213ENST00000550629 CGNL1Q0VF96 1302 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 NRKQ7Z2Y5 1582 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 POLR3DP05423 398 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-213ENST00000550629 EDN3P14138 238 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 PEAR1Q5VY43 1037 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-213ENST00000550629 KRT28Q7Z3Y7 464 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 TMEM102Q8N9M5 508 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-213ENST00000550629 CARD10Q9BWT7 1032 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 PCMTD2Q9NV79 361 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 ARHGEF10O15013 1369 aa7.81□□□□□ -1.16
SCAF11-213ENST00000550629 SOWAHDA6NJG2 315 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 TM4SF5O14894 197 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 FSCN2O14926 492 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 PIP4K2BP78356 416 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 FBXO41Q8TF61 875 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 NXPE3Q969Y0 559 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 FAM129BQ96TA1 746 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 GNEQ9Y223 722 aaKnown RBP7.8□□□□□ -1.16
SCAF11-213ENST00000550629 KNSTRNQ9Y448 316 aa7.8□□□□□ -1.16
SCAF11-213ENST00000550629 TRPM3Q9HCF6 1732 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms