RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 RBM5P52756 815 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDE1B-206ENST00000550285 NUCB2P80303 420 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 RASSF7Q02833 373 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 TMEM87BQ96K49 555 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 MYH1P12882 1939 aa17.1■□□□□ 0.33
PDE1B-206ENST00000550285 FOCADQ5VW36 1801 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 GOLGA8BA8MQT2 603 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 POLR3DP05423 398 aaPredicted RBP17.09■□□□□ 0.33
PDE1B-206ENST00000550285 SYT1P21579 422 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 ESR2Q92731 530 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 DDX11Q96FC9 970 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 DDX60LQ5H9U9 1706 aaKnown RBP17.09■□□□□ 0.33
PDE1B-206ENST00000550285 NMT2O60551 498 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 NFIAQ12857 509 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 ZDHHC15Q96MV8 337 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
PDE1B-206ENST00000550285 BRD1O95696 1058 aa17.08■□□□□ 0.33
PDE1B-206ENST00000550285 RSBN1LQ6PCB5 846 aaPredicted RBP17.08■□□□□ 0.33
PDE1B-206ENST00000550285 CCDC144CPQ8IYA2 1237 aa17.08■□□□□ 0.33
PDE1B-206ENST00000550285 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
PDE1B-206ENST00000550285 CXCL9Q07325 125 aa17.08■□□□□ 0.32
PDE1B-206ENST00000550285 APOA5Q6Q788 366 aa17.08■□□□□ 0.32
PDE1B-206ENST00000550285 NFXL1Q6ZNB6 911 aa17.08■□□□□ 0.32
PDE1B-206ENST00000550285 ZFPM1Q8IX07 1006 aa17.08■□□□□ 0.32
PDE1B-206ENST00000550285 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
PDE1B-206ENST00000550285 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
PDE1B-206ENST00000550285 TNKSO95271 1327 aa17.07■□□□□ 0.32
PDE1B-206ENST00000550285 ORC4O43929 436 aa17.07■□□□□ 0.32
PDE1B-206ENST00000550285 SLURP2P0DP57 97 aa17.07■□□□□ 0.32
PDE1B-206ENST00000550285 SEC23AQ15436 765 aa17.07■□□□□ 0.32
PDE1B-206ENST00000550285 GMLQ99445 158 aa17.07■□□□□ 0.32
PDE1B-206ENST00000550285 ECM29Q5VYK3 1845 aa17.07■□□□□ 0.32
PDE1B-206ENST00000550285 PDE4BQ07343 736 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 MRIQ9BWK5 157 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 SERPINA10Q9UK55 444 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 SLC3A2P08195 630 aaKnown RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 LIFRP42702 1097 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 WTAPQ15007 396 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 FOXD4L6Q3SYB3 417 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 FOXD4L3Q6VB84 417 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 ENAHQ8N8S7 591 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 SMARCC2Q8TAQ2 1214 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 ZSCAN10Q96SZ4 725 aaPredicted RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
PDE1B-206ENST00000550285 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
PDE1B-206ENST00000550285 PTPDC1A2A3K4 754 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 STX6O43752 255 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 CDC27P30260 824 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 HDLBPQ00341 1268 aaKnown RBP17.05■□□□□ 0.32
PDE1B-206ENST00000550285 TCP10Q12799 353 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 CCDC69A6NI79 296 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
PDE1B-206ENST00000550285 MCM4P33991 863 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
PDE1B-206ENST00000550285 LARP1BQ659C4 914 aaKnown RBP17.05■□□□□ 0.32
PDE1B-206ENST00000550285 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
PDE1B-206ENST00000550285 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 FOSBP53539 338 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 TFAP4Q01664 338 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
PDE1B-206ENST00000550285 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
PDE1B-206ENST00000550285 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 FAM217BQ9NTX9 383 aaPredicted RBP17.04■□□□□ 0.32
PDE1B-206ENST00000550285 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 ERICH2A1L162 156 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 ZBTB43O43298 467 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
PDE1B-206ENST00000550285 FDPSP14324 419 aaKnown RBP17.04■□□□□ 0.32
PDE1B-206ENST00000550285 CDK8P49336 464 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
PDE1B-206ENST00000550285 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 IL17RBQ9NRM6 502 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 MTMR6Q9Y217 621 aa17.04■□□□□ 0.32
PDE1B-206ENST00000550285 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
PDE1B-206ENST00000550285 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
PDE1B-206ENST00000550285 RASA1P20936 1047 aa17.03■□□□□ 0.32
PDE1B-206ENST00000550285 C16orf86Q6ZW13 317 aa17.03■□□□□ 0.32
PDE1B-206ENST00000550285 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
PDE1B-206ENST00000550285 IQCA1Q86XH1 822 aa17.02■□□□□ 0.32
PDE1B-206ENST00000550285 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
PDE1B-206ENST00000550285 GOLGA8AA7E2F4 631 aa17.02■□□□□ 0.32
PDE1B-206ENST00000550285 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.32
PDE1B-206ENST00000550285 CIAPIN1Q6FI81 312 aa17.02■□□□□ 0.32
PDE1B-206ENST00000550285 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.32
PDE1B-206ENST00000550285 MYO3BQ8WXR4 1341 aa17.02■□□□□ 0.31
PDE1B-206ENST00000550285 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
PDE1B-206ENST00000550285 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms