RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
PFDN5-208ENST00000549995 AIDAQ96BJ3 306 aa14.33□□□□□ -0.12
PFDN5-208ENST00000549995 WNK4Q96J92 1243 aa14.33□□□□□ -0.12
PFDN5-208ENST00000549995 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
PFDN5-208ENST00000549995 CLMNQ96JQ2 1002 aa14.33□□□□□ -0.12
PFDN5-208ENST00000549995 WRNIP1Q96S55 665 aa14.33□□□□□ -0.12
PFDN5-208ENST00000549995 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.12
PFDN5-208ENST00000549995 PRKG1Q13976 671 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 SBK1Q52WX2 424 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 SPRYD7Q5W111 196 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 TATDN1Q6P1N9 297 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 SDR42E1Q8WUS8 393 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 GINM1Q9NU53 330 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 PPP4R2Q9NY27 417 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 ZMYM6O95789 1325 aa14.32□□□□□ -0.12
PFDN5-208ENST00000549995 TESPA1A2RU30 521 aaPredicted RBP14.31□□□□□ -0.12
PFDN5-208ENST00000549995 GSG1L2A8MUP6 293 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 FOXP2O15409 715 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 PRKAB2O43741 272 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 CTNND1O60716 968 aaKnown RBP14.31□□□□□ -0.12
PFDN5-208ENST00000549995 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 INPP5BP32019 993 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 GJA5P36382 358 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 MIGA2Q7L4E1 593 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 TTC6Q86TZ1 520 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 ZSCAN29Q8IWY8 852 aaPredicted RBP14.31□□□□□ -0.12
PFDN5-208ENST00000549995 SCYL3Q8IZE3 742 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 SEC62Q99442 399 aaKnown RBP14.31□□□□□ -0.12
PFDN5-208ENST00000549995 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
PFDN5-208ENST00000549995 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
PFDN5-208ENST00000549995 A0A0D9SFI3 127 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 HIP1O00291 1037 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 AOC2O75106 756 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 SDSP20132 328 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 PPATQ06203 517 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 PPIL2Q13356 520 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 C12orf60Q5U649 245 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 ERO1BQ86YB8 467 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 ZKSCAN4Q969J2 545 aaPredicted RBP14.3□□□□□ -0.12
PFDN5-208ENST00000549995 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
PFDN5-208ENST00000549995 SERPINB13Q9UIV8 391 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 KCNH4Q9UQ05 1017 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 CSADQ9Y600 493 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 SLC4A4Q9Y6R1 1079 aa14.3□□□□□ -0.12
PFDN5-208ENST00000549995 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 SLURP2P0DP57 97 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 TM4SF4P48230 202 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 PLCD1P51178 756 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 RRP1BQ14684 758 aaKnown RBP14.29□□□□□ -0.12
PFDN5-208ENST00000549995 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 ZIC5Q96T25 663 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 CFHR5Q9BXR6 569 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 TBC1D2Q9BYX2 928 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 ELP3Q9H9T3 547 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.29□□□□□ -0.12
PFDN5-208ENST00000549995 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 RAD50Q92878 1312 aa14.29□□□□□ -0.12
PFDN5-208ENST00000549995 PATL2C9JE40 543 aaKnown RBP14.28□□□□□ -0.12
PFDN5-208ENST00000549995 SHMT1P34896 483 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 CAP2P40123 477 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 KIF23Q02241 960 aaPredicted RBP14.28□□□□□ -0.12
PFDN5-208ENST00000549995 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
PFDN5-208ENST00000549995 ALX1Q15699 326 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 BMP2KLQ5H9B9 411 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 OPTNQ96CV9 577 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 FAM227BQ96M60 508 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 SWAP70Q9UH65 585 aa14.28□□□□□ -0.12
PFDN5-208ENST00000549995 SAP30BPQ9UHR5 308 aaKnown RBP14.28□□□□□ -0.12
PFDN5-208ENST00000549995 MANSC4A6NHS7 340 aaPredicted RBP14.27□□□□□ -0.13
PFDN5-208ENST00000549995 FAM196BA6NMK8 535 aa14.27□□□□□ -0.13
PFDN5-208ENST00000549995 INHBEP58166 350 aa14.27□□□□□ -0.13
PFDN5-208ENST00000549995 MAP2K1Q02750 393 aaPredicted RBP14.27□□□□□ -0.13
PFDN5-208ENST00000549995 C16orf86Q6ZW13 317 aa14.27□□□□□ -0.13
PFDN5-208ENST00000549995 PAXIP1Q6ZW49 1069 aaPredicted RBP14.27□□□□□ -0.13
PFDN5-208ENST00000549995 IFNL3Q8IZI9 196 aa14.27□□□□□ -0.13
PFDN5-208ENST00000549995 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
PFDN5-208ENST00000549995 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 USP17L21D6R901 530 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 CXCL11O14625 94 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 PTPRAP18433 802 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 EVX2Q03828 476 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 SREBF2Q12772 1141 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 ZNF589Q86UQ0 364 aaPredicted RBP14.26□□□□□ -0.13
PFDN5-208ENST00000549995 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 DDRGK1Q96HY6 314 aa14.26□□□□□ -0.13
PFDN5-208ENST00000549995 CA12O43570 354 aa14.25□□□□□ -0.13
PFDN5-208ENST00000549995 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
PFDN5-208ENST00000549995 ASNSP08243 561 aa14.25□□□□□ -0.13
PFDN5-208ENST00000549995 CYP2D6P10635 497 aa14.25□□□□□ -0.13
PFDN5-208ENST00000549995 GTF2A2P52657 109 aa14.25□□□□□ -0.13
PFDN5-208ENST00000549995 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
PFDN5-208ENST00000549995 JAG1P78504 1218 aa14.25□□□□□ -0.13
PFDN5-208ENST00000549995 MOGSQ13724 837 aa14.25□□□□□ -0.13
PFDN5-208ENST00000549995 CCDC129Q6ZRS4 1044 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms