RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SLC45A1Q9Y2W3 748 aa16.45■□□□□ 0.22
GCN1-206ENST00000549815 MS4A1P11836 297 aa16.44■□□□□ 0.22
GCN1-206ENST00000549815 KIF22Q14807 665 aa16.44■□□□□ 0.22
GCN1-206ENST00000549815 PARK7Q99497 189 aaKnown RBP16.44■□□□□ 0.22
GCN1-206ENST00000549815 MGAMO43451 1857 aa16.44■□□□□ 0.22
GCN1-206ENST00000549815 FLT1P17948 1338 aa16.44■□□□□ 0.22
GCN1-206ENST00000549815 LOC285556D6RIA3 1793 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 CAP2P40123 477 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 PRMT2P55345 433 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 METTL16Q86W50 562 aaKnown RBP16.43■□□□□ 0.22
GCN1-206ENST00000549815 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 MAPKAPK5Q8IW41 473 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 RPAP2Q8IXW5 612 aaPredicted RBP16.43■□□□□ 0.22
GCN1-206ENST00000549815 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
GCN1-206ENST00000549815 DHX36Q9H2U1 1008 aaKnown RBP16.43■□□□□ 0.22
GCN1-206ENST00000549815 DNAJC18Q9H819 358 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 ZBTB40Q9NUA8 1239 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
GCN1-206ENST00000549815 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
GCN1-206ENST00000549815 TRIM75PA6NK02 468 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 PLCG2P16885 1265 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 PSMC4P43686 418 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 DYNLL1P63167 89 aaKnown RBP16.42■□□□□ 0.22
GCN1-206ENST00000549815 SLC9C1Q4G0N8 1177 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 GADL1Q6ZQY3 521 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 AACSQ86V21 672 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 ANTXR1Q9H6X2 564 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 PI4KBQ9UBF8 816 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
GCN1-206ENST00000549815 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
GCN1-206ENST00000549815 EN2P19622 333 aaPredicted RBP16.41■□□□□ 0.22
GCN1-206ENST00000549815 OSBPP22059 807 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 CYP7A1P22680 504 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 NBPF11Q86T75 865 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 SH3TC2Q8TF17 1288 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 AGTPBP1Q9UPW5 1226 aa16.41■□□□□ 0.22
GCN1-206ENST00000549815 JAG1P78504 1218 aa16.4■□□□□ 0.22
GCN1-206ENST00000549815 TREML2Q5T2D2 321 aa16.4■□□□□ 0.22
GCN1-206ENST00000549815 PRPF38BQ5VTL8 546 aaKnown RBP16.4■□□□□ 0.22
GCN1-206ENST00000549815 FOXP4Q8IVH2 680 aaPredicted RBP16.4■□□□□ 0.22
GCN1-206ENST00000549815 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
GCN1-206ENST00000549815 ZNF280CQ8ND82 737 aa16.4■□□□□ 0.22
GCN1-206ENST00000549815 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
GCN1-206ENST00000549815 RCAN3Q9UKA8 241 aa16.4■□□□□ 0.22
GCN1-206ENST00000549815 MYH1P12882 1939 aa16.39■□□□□ 0.21
GCN1-206ENST00000549815 USP17L5A8MUK1 530 aa16.39■□□□□ 0.21
GCN1-206ENST00000549815 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
GCN1-206ENST00000549815 FMNL1O95466 1100 aaPredicted RBP16.39■□□□□ 0.21
GCN1-206ENST00000549815 SPP2Q13103 211 aa16.39■□□□□ 0.21
GCN1-206ENST00000549815 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
GCN1-206ENST00000549815 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
GCN1-206ENST00000549815 PALD1Q9ULE6 856 aa16.39■□□□□ 0.21
GCN1-206ENST00000549815 HOXD10P28358 340 aa16.38■□□□□ 0.21
GCN1-206ENST00000549815 TMED8Q6PL24 325 aaPredicted RBP16.38■□□□□ 0.21
GCN1-206ENST00000549815 MIGA1Q8NAN2 632 aa16.38■□□□□ 0.21
GCN1-206ENST00000549815 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
GCN1-206ENST00000549815 KIF1BPQ96EK5 621 aa16.38■□□□□ 0.21
GCN1-206ENST00000549815 TMEM106CQ9BVX2 250 aa16.38■□□□□ 0.21
GCN1-206ENST00000549815 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
GCN1-206ENST00000549815 DDX60LQ5H9U9 1706 aaKnown RBP16.37■□□□□ 0.21
GCN1-206ENST00000549815 HMMRO75330 724 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 HMGCS2P54868 508 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 FCGRTP55899 365 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 PRKCZQ05513 592 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 MAP3K12Q12852 859 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 SHROOM1Q2M3G4 852 aaPredicted RBP16.37■□□□□ 0.21
GCN1-206ENST00000549815 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
GCN1-206ENST00000549815 RIOK1Q9BRS2 568 aaKnown RBP16.37■□□□□ 0.21
GCN1-206ENST00000549815 WDR18Q9BV38 432 aa16.37■□□□□ 0.21
GCN1-206ENST00000549815 SAP30BPQ9UHR5 308 aaKnown RBP16.37■□□□□ 0.21
GCN1-206ENST00000549815 RAB11FIP3O75154 756 aa16.36■□□□□ 0.21
GCN1-206ENST00000549815 ASNSP08243 561 aa16.36■□□□□ 0.21
GCN1-206ENST00000549815 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
GCN1-206ENST00000549815 AS3MTQ9HBK9 375 aa16.36■□□□□ 0.21
GCN1-206ENST00000549815 GABRQQ9UN88 632 aa16.36■□□□□ 0.21
GCN1-206ENST00000549815 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 SLC34A2O95436 690 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 HLA-DOAP06340 250 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 GRK4P32298 578 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 BACE1P56817 501 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 MTFR1Q15390 333 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 FAM110CQ1W6H9 321 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 RAET1EQ8TD07 263 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 SMCR8Q8TEV9 937 aaPredicted RBP16.35■□□□□ 0.21
GCN1-206ENST00000549815 GINM1Q9NU53 330 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 ZBTB21Q9ULJ3 1066 aa16.35■□□□□ 0.21
GCN1-206ENST00000549815 APBB1O00213 710 aa16.34■□□□□ 0.21
GCN1-206ENST00000549815 GDF11O95390 407 aa16.34■□□□□ 0.21
GCN1-206ENST00000549815 MYCP01106 439 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms