RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 HELLSQ9NRZ9 838 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 CSADQ9Y600 493 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 SNCAIPQ9Y6H5 919 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 SLC4A4Q9Y6R1 1079 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 A0A0D9SFI3 127 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 SLURP2P0DP57 97 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 SDSP20132 328 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 INPP5BP32019 993 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 TTC6Q86TZ1 520 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 DNAJC18Q9H819 358 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 MCM9Q9NXL9 1143 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 MYH8P13535 1937 aa21.23■□□□□ 0.99
RAPGEF3-220ENST00000549347 PHIPQ8WWQ0 1821 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 FAM196BA6NMK8 535 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 MAP2K2P36507 400 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 GRM1Q13255 1194 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 GIMAP6Q6P9H5 292 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 SKAP1Q86WV1 359 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 FOXP4Q8IVH2 680 aaPredicted RBP21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 SLC10A4Q96EP9 437 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 FAM227BQ96M60 508 aa21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.22■□□□□ 0.99
RAPGEF3-220ENST00000549347 GSG1L2A8MUP6 293 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 HIP1O00291 1037 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 ZBTB48P10074 688 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 NMIQ13287 307 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 SLC4A8Q2Y0W8 1093 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 SPRYD7Q5W111 196 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 ZKSCAN4Q969J2 545 aaPredicted RBP21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 WNK4Q96J92 1243 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 ELP3Q9H9T3 547 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 SERPINB13Q9UIV8 391 aa21.21■□□□□ 0.99
RAPGEF3-220ENST00000549347 SPDYE5A6NIY4 337 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 AOC2O75106 756 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 POLR3DP05423 398 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 PLCD1P51178 756 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 MCMDC2Q4G0Z9 681 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 CCDC129Q6ZRS4 1044 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 SCYL3Q8IZE3 742 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 CRACR2BQ8N4Y2 399 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 EPB41L4AQ9HCS5 686 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 ARPP21Q9UBL0 812 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 TAOK2Q9UL54 1235 aa21.2■□□□□ 0.98
RAPGEF3-220ENST00000549347 CTNND1O60716 968 aaKnown RBP21.19■□□□□ 0.98
RAPGEF3-220ENST00000549347 GJA5P36382 358 aa21.19■□□□□ 0.98
RAPGEF3-220ENST00000549347 GABPAQ06546 454 aa21.19■□□□□ 0.98
RAPGEF3-220ENST00000549347 OPTNQ96CV9 577 aa21.19■□□□□ 0.98
RAPGEF3-220ENST00000549347 DIAPH3Q9NSV4 1193 aa21.19■□□□□ 0.98
RAPGEF3-220ENST00000549347 PATL2C9JE40 543 aaKnown RBP21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 FOXP2O15409 715 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 CYP2D6P10635 497 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 SBK1Q52WX2 424 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 ERO1BQ86YB8 467 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 AMOTL1Q8IY63 956 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 TRIM34Q9BYJ4 488 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 CCDC171Q6TFL3 1326 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 ROBO3Q96MS0 1386 aa21.18■□□□□ 0.98
RAPGEF3-220ENST00000549347 PTPRFP10586 1907 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 USP17L12C9JPN9 530 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 USP17L21D6R901 530 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 EVX2Q03828 476 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 BMP2KLQ5H9B9 411 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 C12orf60Q5U649 245 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 CTR9Q6PD62 1173 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 ZNF589Q86UQ0 364 aaPredicted RBP21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 CNKSR2Q8WXI2 1034 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 ZIC5Q96T25 663 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 LAMA4Q16363 1823 aa21.17■□□□□ 0.98
RAPGEF3-220ENST00000549347 CAP2P40123 477 aa21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 KIF23Q02241 960 aaPredicted RBP21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 RRP1BQ14684 758 aaKnown RBP21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 TATDN1Q6P1N9 297 aa21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 REM2Q8IYK8 340 aaPredicted RBP21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 IFNL3Q8IZI9 196 aa21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 OTUD5Q96G74 571 aa21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 NACAP1Q9BZK3 213 aa21.16■□□□□ 0.98
RAPGEF3-220ENST00000549347 RAD50Q92878 1312 aa21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 SHMT1P34896 483 aa21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 TDO2P48775 406 aa21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 MFAP1P55081 439 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 PPATQ06203 517 aa21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 MKRN3Q13064 507 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 PPIL2Q13356 520 aa21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 CWC27Q6UX04 472 aaKnown RBP21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 PICK1Q9NRD5 415 aa21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.15■□□□□ 0.98
RAPGEF3-220ENST00000549347 ZMYM6O95789 1325 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 CYP2D7A0A087X1C5 515 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 APPP05067 770 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 PTPRAP18433 802 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 MAP2K1Q02750 393 aaPredicted RBP21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 VPS53Q5VIR6 699 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 NAPBQ9H115 298 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 GINM1Q9NU53 330 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 SWAP70Q9UH65 585 aa21.14■□□□□ 0.97
RAPGEF3-220ENST00000549347 MANSC4A6NHS7 340 aaPredicted RBP21.13■□□□□ 0.97
RAPGEF3-220ENST00000549347 CHMLP26374 656 aa21.13■□□□□ 0.97
RAPGEF3-220ENST00000549347 C16orf86Q6ZW13 317 aa21.13■□□□□ 0.97
RAPGEF3-220ENST00000549347 GREB1LQ9C091 1923 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms