RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.57
RAB5B-205ENST00000549034 NMIQ13287 307 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-205ENST00000549034 CCDC129Q6ZRS4 1044 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 TICAM2Q86XR7 235 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 CRACR2BQ8N4Y2 399 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-205ENST00000549034 ZKSCAN4Q969J2 545 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-205ENST00000549034 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 FAM227BQ96M60 508 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 WRNIP1Q96S55 665 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 DCP1AQ9NPI6 582 aaPredicted RBP11.52□□□□□ -0.57
RAB5B-205ENST00000549034 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 ATP8A2Q9NTI2 1148 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 CSADQ9Y600 493 aa11.52□□□□□ -0.57
RAB5B-205ENST00000549034 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 HIP1O00291 1037 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 AOC2O75106 756 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 GNAT2P19087 354 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 PLCD1P51178 756 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 MAP3K10Q02779 954 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 MKRN3Q13064 507 aaKnown RBP11.51□□□□□ -0.57
RAB5B-205ENST00000549034 CWC27Q6UX04 472 aaKnown RBP11.51□□□□□ -0.57
RAB5B-205ENST00000549034 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-205ENST00000549034 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAB5B-205ENST00000549034 ELP3Q9H9T3 547 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 ZNF112Q9UJU3 913 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 RPAP1Q9BWH6 1393 aaPredicted RBP11.51□□□□□ -0.57
RAB5B-205ENST00000549034 PAPPA2Q9BXP8 1791 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 FOCADQ5VW36 1801 aa11.51□□□□□ -0.57
RAB5B-205ENST00000549034 SSC5DA1L4H1 1573 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 UNCXA6NJT0 531 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 GSG1L2A8MUP6 293 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 PHF20L1A8MW92 1017 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 USP17L21D6R901 530 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 CYP2D6P10635 497 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 INPP5BP32019 993 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
RAB5B-205ENST00000549034 IFNL3Q8IZI9 196 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 HERC5Q9UII4 1024 aaKnown RBP11.5□□□□□ -0.57
RAB5B-205ENST00000549034 ATRNL1Q5VV63 1379 aa11.5□□□□□ -0.57
RAB5B-205ENST00000549034 BAZ2AQ9UIF9 1905 aaKnown RBP11.5□□□□□ -0.57
RAB5B-205ENST00000549034 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 FAM155AB1AL88 458 aaPredicted RBP11.49□□□□□ -0.57
RAB5B-205ENST00000549034 SLC10A3P09131 477 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 TDO2P48775 406 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 KIF23Q02241 960 aaPredicted RBP11.49□□□□□ -0.57
RAB5B-205ENST00000549034 VGLL4Q14135 290 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 RASAL3Q86YV0 1011 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 STK11IPQ8N1F8 1099 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 NACAP1Q9BZK3 213 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 SERPINB13Q9UIV8 391 aa11.49□□□□□ -0.57
RAB5B-205ENST00000549034 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 CTNND1O60716 968 aaKnown RBP11.48□□□□□ -0.57
RAB5B-205ENST00000549034 CHMLP26374 656 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 MAP2K2P36507 400 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 MFAP1P55081 439 aaKnown RBP11.48□□□□□ -0.57
RAB5B-205ENST00000549034 NOGQ13253 232 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 C12orf60Q5U649 245 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 GIMAP6Q6P9H5 292 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 RUFY2Q8WXA3 655 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 OPTNQ96CV9 577 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 WNK4Q96J92 1243 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 PICK1Q9NRD5 415 aa11.48□□□□□ -0.57
RAB5B-205ENST00000549034 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
RAB5B-205ENST00000549034 CAP2P40123 477 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 EVX2Q03828 476 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 RRP1BQ14684 758 aaKnown RBP11.47□□□□□ -0.57
RAB5B-205ENST00000549034 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
RAB5B-205ENST00000549034 SBK1Q52WX2 424 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 VPS53Q5VIR6 699 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 METTL16Q86W50 562 aaKnown RBP11.47□□□□□ -0.57
RAB5B-205ENST00000549034 ERO1BQ86YB8 467 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 SCYL3Q8IZE3 742 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 NAPBQ9H115 298 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 EHD4Q9H223 541 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 SNCAIPQ9Y6H5 919 aa11.47□□□□□ -0.57
RAB5B-205ENST00000549034 CCDC171Q6TFL3 1326 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 SMIM22K7EJ46 135 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 HSPD1P10809 573 aaKnown RBP11.46□□□□□ -0.57
RAB5B-205ENST00000549034 CDK8P49336 464 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 PPATQ06203 517 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 BMP2KLQ5H9B9 411 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 NOL9Q5SY16 702 aaKnown RBP11.46□□□□□ -0.57
RAB5B-205ENST00000549034 ZNF589Q86UQ0 364 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-205ENST00000549034 DNAJC18Q9H819 358 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 EPB41L4AQ9HCS5 686 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-205ENST00000549034 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-205ENST00000549034 ZHX2Q9Y6X8 837 aa11.46□□□□□ -0.57
RAB5B-205ENST00000549034 NAV1Q8NEY1 1877 aa11.46□□□□□ -0.58
RAB5B-205ENST00000549034 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
RAB5B-205ENST00000549034 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms